« Back to Triticum dicoccoides search


Detailed information on CNT30661887


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30684964Triticum dicoccoidesTriticum urartu38.1844.5989.18231forward
CNT30722083Triticum dicoccoidesTriticum spelta31.934.1689.64193forward

Expression of CNT30661887

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LSSNIGFQHDIPIHDRRDRCITDDRPTER*

>peptide 2 (36 aa)
MPPPPSPGAATLFDCKKQSLLDGNPPGLGGQPWIRA*

>peptide 3 (39 aa)
MGQGNNLSGDKTTGSGAGARKGSSMYYAAATFPRRGDPV*

Sequence

>CNT30661887
CTGAGTTCAAACATAGGATTCCAACATGACATCCCAATCCATGACAGAAGGGATCGCTGCATCACCGACGACCGACCGACTGAAAGATAACATGTTGTTT
CTTCCTTCATAACCAGCTCTAATTAACCCCGGACAGAGAGACACTCGAGCTCGGGATCAAAAACCCCACAGGTATCAACGACACGACACACGACTCAAGA
CTGACACAGGAACACGACGACGCCTACAGTCAGTAACATTCAGTACAAATTAAGTACTAAAAGATAACAAATTCAGTACATTCAGAAATCAGAATCACAG
TGGAGCACATATGCAGAAATTGGCAGCGACAGTGGCAGAAATTGACGGCGGAGCCATCTGTGTAAATTGACAGCGGCAGTGGCGAAGCAAGGGGAAGATG
GGGCAGGGGAACAACCTGAGCGGAGACAAGACAACAGGCTCGGGGGCTGGGGCGAGGAAGGGGAGCTCGATGTACTATGCCGCCGCCACCTTCCCCCGGC
GCGGCGACCCTGTTTGACTGCAAGAAGCAGAGTTTGTTGGATGGGAATCCACCAGGGCTGGGCGGCCAGCCATGGATAAGGGCCTAGAGCCTCCAAAACA
ACGAC