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Detailed information on CNT30661706


BLAST search results

BLAST vs Swiss-Prot:
sp|Q942A8|GL13_ORYSJ, E-value = 2e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690449Triticum dicoccoidesOryza sativa14.8121.2984.3896forward
CNT30188538Triticum dicoccoidesSecale cereale24.0748.7596.15156forward
CNT30552278Triticum dicoccoidesOryza glaberrima33.3324.4982.87216forward
CNT30595500Triticum dicoccoidesOryza meridionalis33.3333.8682.87216forward
CNT3099678Triticum dicoccoidesOryza rufipogon35.837.684.05232forward
CNT30574949Triticum dicoccoidesOryza barthii33.3331.1283.33216forward
CNT30117885Triticum dicoccoidesOryza nivara35.6526.3784.42231forward

Expression of CNT30661706

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MASYFGGNLDLMASTRPPSIWSALASTSVGTGGEAANNARARDCVPGSWLLKAEMAAAGAPPLFFW*

Sequence

>CNT30661706
AAAGCAATAGTTATAGCAGTACAACCGACGAGGCCATTCACTAAACATGCACCGCCACAAAAGATATTCTCAGGCAAATGATTTTTTTTAGGATGTCAGG
CAAATGAATTAAAACTGCACTTTTACGTGGTCCTCGTTATTATTAGCAGCACGTACGCACGTAGAGCCGACCCAGCCAACCTCATGCATGCATGGCTAGT
TACTTTGGCGGGAACTTGGACTTGATGGCCTCCACCAGGCCGCCGTCGATCTGGAGCGCCCTGGCCAGCACGTCCGTGGGCACTGGTGGCGAGGCTGCGA
ACAACGCTAGGGCGAGGGACTGCGTGCCCGGAAGCTGGCTGTTGAAGGCCGAGATGGCGGCGGCCGGGGCGCCCCCGTTGTTCTTCTGGTAGTGGACGAG
GCCGCGGGGGAAGACGAAAAGCTCGCCCTTGCAGACGGTGCGGGCGAAGAGCTTGCCGGCGGTGGTGACGAAGCCGACGTCGAGGGAGCCCTCCAGCACG
TAAATGATCTCGGTGGCGCGCGGGTGGGTGTGCGGCGGGTTCACGCCCCACGGCGCGTAGTCCACGCGGGACATGGAGACGCCCATCGTGTTGAGCCCCG
GGAGCTTCTCCACGTTCGCCGCCGTCACCGCAGATCCGACGGGGTTGC