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Detailed information on CNT30661507


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30293174Triticum dicoccoidesTriticum aestivum98.5997.3499.52841forward
CNT30683520Triticum dicoccoidesTriticum urartu79.9547.6389682forward

Expression of CNT30661507

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MGSTRPRVGRWLALHDSACRDPSRRAHPVSERPGMRPVSGGLVRHEIKVLFG*

>peptide 2 (45 aa)
MRPAGCSTASLGCRKRPCRRTSRREPDAHSPDRGYRFKTQQQTYG*

>peptide 3 (78 aa)
MPPFPSWTDQIPWRRWGTAGHAAGWVQHCFAGMPQEAVQAHIKTGARCTLAGQRLQIQDTTTNLWMKSQELLPCRRTP*

>peptide 4 (45 aa)
MHTRRTEVTDSRHNNKPMDEVAGAPSMPKNTVDAGPRERAILYRS*

Sequence

>CNT30661507
CGGACGCTTCGAGCTAGTACTACCATTATTCCACTGAACTAAGCTCCGTGAGTGAGAGAGATAGAGAGATCCAGAAAGTGAGGTCCGCCGTCCGGCAGCG
TCGTGGTCGTGGCGAGCAACAGAGGGAGCAGTCGCGGCTGCCGCTGCCTGACTCCGGCGCGCCCAAGCCCCGGCCAAGGCTGGAGCAGCTGCTCTGGCAT
GCCGCCGTTCCCCTCCTGGACCGACCAGATCCCTTGGAGAAGGTGGGGAACTGCAGGGCATGCGGCCGGCTGGGTGCAGCACTGCTTCGCTGGGATGCCG
CAAGAGGCCGTGCAGGCGCACATCAAGACGGGAGCCAGATGCACACTCGCCGGACAGAGGTTACAGATTCAAGACACAACAACAAACCTATGGATGAAGT
CGCAGGAGCTCCTTCCATGCCGAAGAACACCGTAGATGCTGGTCCACGTGAGAGGGCAATTCTCTATCGATCCTGATCTATTCTCGTGTGATCCACAATG
GAGTAGATAGATAGGAGAAAGGATGTTGGCGATTTTGGCGGCAATCTGTTGATACGCGCGAGAAAGAAAGGCAGTTTTACTGATTTTATGTAATTAGAGA
GATACGGGCTGGTTGTCTTAGTGATGGGGTCCACCAGGCCACGTGTTGGCCGCTGGTTGGCCCTGCACGATAGTGCGTGCAGGGATCCCAGCAGGAGAGC
CCATCCCGTGTCGGAACGGCCCGGAATGAGGCCCGTTTCGGGCGGTTTGGTTCGGCATGAAATAAAAGTGCTGTTTGGTTAGTCTGATTCGGAATCAAAC
CTGATTTTACAATTTTAGTTGGGACCCATTTTTACTTTGCCGATGAAATATAA