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Detailed information on CNT30661152


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SDN0|DNJ20_ARATH, E-value = 7e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30293409Triticum dicoccoidesTriticum aestivum21.6643.31100149forward
CNT3099630Triticum dicoccoidesOryza rufipogon30.5245.9586.19210forward
CNT30574744Triticum dicoccoidesOryza barthii35.1748.0286.36242forward

Expression of CNT30661152

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLRMASGHKSVRGALSQLFSPSSHLSSPG*

>peptide 2 (44 aa)
MKRRVCSLVASGGDTSGWYLRAIRRYAARTSSKVLPSGEIPSRS*

Sequence

>CNT30661152
TGTAACTCCGATCCTAAGCATGCTTCTTAAGCATAACCTTTCTAACTTCTGCTACTCAAAGATATAGACAGTTTAGATGCTACGGATGGCTAGTGGACAT
AAGAGTGTCCGAGGAGCACTGTCACAATTGTTCAGCCCTTCTTCGCATCTGAGCTCCCCAGGATAGGTTCTCTTCTGCGTCCTTCACCGTGCTCCGCTTC
TTCAGCTCGGATATTTGGCCTTCCCAGGACGTCCTCCATCCAGACCTCTCTTCCTGCTCCTGTAGTATGAAGGCGAGGCGGCAGACGCCGCGGGCGAGGG
CGCGGTCGTAGCTGGTGCGGCGGCTGGGGTCGGAGAGCGTCTCGTAGGCCTCCTGCACCTGGATGAAGCGGCGCGTGTGCTCCTTGGTGGCGTCCGGCGG
GGACACGTCCGGGTGGTACTTGCGCGCCATCCGCCGGTACGCCGCCCGCACGTCCTCGAAGGTGCTCCCCTCCGGCGAGATCCCCAGCAGGTCGTAGAAC
GTCGGCTGCTGCGTCTGCTGCTGCACCGCCGTGGCCGTGCGCGCGGCTCCTCCGGCCGTGGCAGACGCCCGCGCCCGCGTCGGCGCGCGGGGTGGGGCAT
GTGTGCGGCCTGGTGCACCGGGTCGGATCTCTGTCTCAGCTCCACCTGATCTGATCTGCTCAGCTTTCGCGCTTGCTTGGCTTAGCCG