Detailed information on CNT30661043


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZC0|UXS1_ARATH, E-value = 2e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30182233Triticum dicoccoidesSecale cereale71.242.1296.95262forward
CNT30244810Triticum dicoccoidesAvena sativa10045.5490.76368forward
CNT30457014Triticum dicoccoidesSaccharum spontaneum55.7126.8390.24205forward
CNT30134072Triticum dicoccoidesLolium perenne10050.6992.66368forward

Expression of CNT30661043

Peptides detected in this lncRNA

>peptide 1 (49 aa)
VDEVAAHEARPAGDDDAARRRAEARGDAAGVRRVAGEGEDGASLGGVGG*

>peptide 2 (54 aa)
STRWLPTKPAPPVTTTRRGGGRKPAGTPRESDEWPVKEKMGLRSVGLEADREKR*

Sequence

>CNT30661043
GTCGACGAGGTGGCTGCCCACGAAGCCCGCCCCGCCGGTGACGACGACGCGGCGAGGCGGCGGGCGGAAGCCCGCGGGGACGCCGCGGGAGTCCGACGAG
TGGCCGGTGAAGGAGAAGATGGGGCTTCGCTCGGTGGGGTTGGAGGCTGACAGGGAGAAGAGGTAGGGGCGGAGGAGGAAGAAGGAGGTGGCGATGAGCG
CACCGAGGAGGACGAAGAGGAGGCGCTGCTCGCGGAGGAGGTAGCCGACCCAGGTGCGCGGCCCGGGGCGCGCGGGCTTGGAGATCTTGGACGCCGGCGC
GTGCGCCGGCGACGGCGCGTGGGTGGGGGACTTGTGGAGCTGCTTCATGGCGGGAGAGCGGCGGGGAG