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Detailed information on CNT30659902


BLAST search results

BLAST vs Swiss-Prot:
sp|P32112|SAHH_WHEAT, E-value = 2e-41

BLAST vs NONCODE:
NONGMAT001730, E-value = 5e-70

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639595Triticum dicoccoidesNymphaea colorata23.715.4789.0473forward
CNT30628366Triticum dicoccoidesVigna unguiculata61.6913.391.58190forward
CNT3096327Triticum dicoccoidesSolanum tuberosum34.7413.4684.11107forward
CNT30221157Triticum dicoccoidesHordeum vulgare36.3653.3398.21112forward
CNT30587418Triticum dicoccoidesMusa acuminata38.3115.5589.83118forward
CNT30510798Triticum dicoccoidesSolanum lycopersicum29.8735.5283.792forward
CNT30435910Triticum dicoccoidesAegilops tauschii54.8721.298.22169forward
CNT308389Triticum dicoccoidesZea mays49.3569.7288.82152forward
CNT30681317Triticum dicoccoidesTriticum urartu51.9532.6598.75160forward
CNT30720265Triticum dicoccoidesTriticum spelta55.1962.594.12170forward
CNT30365159Triticum dicoccoidesSorghum bicolor65.2659.6488.06201forward
CNT30354795Triticum dicoccoidesLactuca sativa39.6114.4981.97122forward
CNT30570586Triticum dicoccoidesVitis vinifera61.6927.5485.26190forward
CNT30645006Triticum dicoccoidesCannabis sativa25.979.7286.2580forward
CNT3026679Triticum dicoccoidesPopulus trichocarpa53.5713.9180165forward

Expression of CNT30659902

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MRTAVWMVMWREPEIRAPLKGCEGPNSVRQAMRPGISTSASSSSRRPKSAWERSLTLYSRPDEVFSTESAMEKVGGLDLAEEEEEE*

Sequence

>CNT30659902
TGCCGGACTCCTGCATCTGGTAGAGCCTCTTGACGCCGGGTCTCGATGAGGACGGCGGTCTGGATGGTCATGTGGAGGGAGCCGGAGATCCGGGCGCCCT
TGAAGGGCTGCGAGGGGCCGAACTCGGTGCGGCAGGCCATGAGGCCGGGCATCTCGACCTCGGCGAGCTCGAGCTCGAGGCGGCCGAAGTCGGCCTGGGA
GAGGTCCTTGACCTTGTACTCCCGGCCCGACGAGGTCTTCTCCACGGAGAGCGCCATGGAGAAGGTTGGTGGATTGGATCTGGCAGAGGAGGAAGAAGAA
GAGTGATG