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Detailed information on CNT30659819


BLAST search results

BLAST vs Swiss-Prot:
sp|P00871|RBS1_WHEAT, E-value = 9e-62

BLAST vs NONCODE:
NONCQUT001608, E-value = 7e-19

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30288857Triticum dicoccoidesTriticum aestivum60.0337.199.58473forward
CNT30387693Triticum dicoccoidesTriticum turgidum61.1745.4399.59482forward
CNT30371468Triticum dicoccoidesOryza glumipatula32.3622.1585.88255forward

Expression of CNT30659819

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MKNMLWSSSRVVDKSEVHKRPSYIGHCFNS*

Sequence

>CNT30659819
GGTCCGCATGTTTTATATAATAAATATCACACAGGTTTTGTATATGTGTAGCCGGCTCTAGAATTTACATATGCATGCTCGAGAATCTATGTTCGTACAT
ACATACACAGACCATATAGAATGAAAAATATGCTCTGGTCGTCCAGCAGAGTCGTGGACAAAAGTGAAGTTCACAAAAGACCTTCATACATAGGCCATTG
TTTCAACTCGTAGTTTAGGCCTTGCCAGACTCCTCGCAACCCGGTGGCCTGAAGGCAATGAAGCTGACGCACTGCACCTGGCGTAGGTTGTCGAAGCCGA
TGACACGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCAGTGCACCCGAACATAGGCAGCTTCCACAT
TGTCCAGTATCGGCCGTCATAGTACCCGGGGGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGCTTCCACATTGTCCAGTA
TCGACCGTCGTAGTACCCGGGGGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCAGCTTCCACATTGTCCAGTATCGA
CCGTCGTAGTAGCCGGGGGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAGGTAGTCGA
CCTGCTTTAGGAGGGCCTCCGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAAT