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Detailed information on CNT30659808


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30387005Triticum dicoccoidesTriticum turgidum81.8432.4199.831181forward
CNT30587177Triticum dicoccoidesMusa acuminata4.7821.0486.9669forward

Expression of CNT30659808

Peptides detected in this lncRNA

>peptide 1 (33 aa)
YSGCSELYPLRIITTGVIPYPTIVMDVVAICKS*

>peptide 2 (59 aa)
MHKSSFQMVTYMRVPSPFAVSSWPQHLHRFAAYNPRGCSVTAEFSKVFEPSVRRDDELS*

>peptide 3 (34 aa)
MLVLHIPFSVRGSKKVRISTRAVCTRALFKWLPT*

>peptide 4 (43 aa)
MIFLQVVQLLSQACCLPLPELWNLNLQLSNATSGLPKVLKETW*

>peptide 5 (29 aa)
MLKGQIGYRIKHIPSGKPLVLFPLGASVQ*

Sequence

>CNT30659808
GTATTCTGGCTGCTCTGAATTGTATCCCTTGAGAATAATAACAACAGGAGTAATCCCATACCCCACGATCGTCATGGATGTAGTTGCAATCTGCAAGAGT
TAATGTTTTCGGGGCCATACCGATGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAGAACTATGGAATTTGAACTTA
CAGTTAAGTAATGCCACATCAGGTTTGCCAAAAGTATTAAAAGAGACATGGTGAAAAGCATGATTCCCTATCAGTGTCATGGAAGTACTGAATCACATGG
TAATATATGCAATTTTATCTGACCGAGTATAATTCATACAGTAAATGTTGAAGGGACAAATAGGTTATAGAATAAAACATATTCCAAGTGGGAAACCTTT
GGTTTTGTTTCCTTTGGGTGCTTCAGTCCAATGACTGTCAAGGCGCACCCAAAAAAATTGACTTAGTGATATCAGGTTGAACATATATTTATACACCCCA
CATGATTTGTTGTCTTAGTCATCTTTAATTCTCACAAATGCTTCTGTGAGGCAAATTAACCTGTTAGCATGTGAGCTTCTAAAGAAGTATGAGCTAGAGG
CAGAACTGGTCTGGAAAATGGTGATTATTCTGCTGGAAGAAGATTTCACGTGGCAGTAGAAGGTTGCAGTTGTTTGATACAGAACTGTCATTTGGGGTTC
ATCTCACAAGTTTCAGTATTTGGGGTTCATCTCACAAGTTTCAGTATAGACTGAAGGATTTGTATGTGTTGTGGATCTTTTTCAGAAGATGGGCACAGGT
ACATGTTCCCTTAGCTCCCATTATTCCTTCTGAGTTTCTGTTATGTTGGTCTTACACATTCCATTTTCTGTCCGAGGTTCAAAGAAGGTTAGGATTTCGA
CGAGAGCTGTATGCACAAGAGCTCTTTTCAAATGGTTACCTACATGAGAGTTCCTAGCCCGTTTGCTGTTTCTTCTTGGCCCCAACATTTGCATCGTTTT
GCGGCCTATAATCCTCGAGGTTGTTCTGTAACTGCAGAATTTAGCAAAGTATTTGAGCCTTCTGTTAGAAGGGACGACGAGCTATCTTAGTGAGAAATAT
ACTCGTGTTGGTTGATACCATTCTAGTTGAGCTTTAATGTTTAGTTCTGTAGTTGATCTGATGGGCCATTTGAATGTAAAACAAACGGTGCTGCAGACAG
CAGAACCTTAGGTTCACCTCAAATAAGCTTCAAGAGTCAAGTAAATTGCAGTTCAGTTTGATGCTCACAAACTAGTTTCATCAGGTGCACCACTGTAAGG
CCATTTTGGTTGGCTTGGATTCGTTTAGTAGTGTATATATCTGTCAAGAGTTCTAATCTGGCTCTGCTAAACCCTACAGTTTGTATGTAGGCAATAACAG
CAGTTCTGCCAATACCTTTCATTGTATAAAGGCGTTTTCAACA