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Detailed information on CNT30659761


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF88|CB4B_ARATH, E-value = 8e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30290500Triticum dicoccoidesTriticum aestivum9184.393.79435forward
CNT30221643Triticum dicoccoidesHordeum vulgare83.26103.1191.46398forward
CNT30387400Triticum dicoccoidesTriticum turgidum98.3393.63100470forward
CNT30554318Triticum dicoccoidesOryza glaberrima38.9126.8491.4186forward
CNT30680980Triticum dicoccoidesTriticum urartu92.6884.5496.39443forward

Expression of CNT30659761

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MVVCSGSLRRACLISASCRVSFFTGSAASPSGSK*

Sequence

>CNT30659761
GTGGATGCTATTTTTGTAATCGCAAAAACGAAACAAAAGATTAGCTCAAGATTGATGTACAAGTGGATGCATTAAGTCACCATTGGTTCATATTTTACAA
ATCACCAAGTCCCAGCAGCTCTCCTATGTGATCAGACCTGCATTAATCAACAAAGGATCTTTGCGATACCCTCTCATCCATCACTCGTCATACAAAACCA
AAGCACGTTCGTACACTGACGCGCGTTCGTCCATTTTGCAGCTGAGCTGACAGAAATTGCTCGACCACCGACCACTTAAGAGGAGCCGAAGGTGTCGAAG
ATGGTGGTGTGCAGCGGGTCGCTGAGGCGGGCGTGCTTGATCTCCGCCAGCTGCAGAGTCTCCTTCTTCACCGGGTCCGCCGCGAGTCCCAGCGGGTCGA
AGTAGGAGCCACCGGGGTAGAGCCTCCTCTCCGGGTCCAGCTCCGCGTTGCGCTGGAACTCGATGTACCCGATCACCA