« Back to Triticum dicoccoides search


Detailed information on CNT30659576


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST001165, E-value = 1e-07

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104484Triticum dicoccoidesOryza rufipogon35.610096.63267forward

Expression of CNT30659576

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG*

>peptide 2 (76 aa)
ESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNPIHRLRALYAQSFRRTLAPPVLPRLLARS*

>peptide 3 (30 aa)
RELPSLLAFLRRSTDFTPTHEIPLSSVSLK*

Sequence

>CNT30659576
AGAGAGCTGCCTTCGCTTTTGGCGTTCCTTCGTAGATCTACGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCACTCAAGTGAATTGGTT
TCGAGAGCATTCCGCCACTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCC
CCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGC
CCTTCTTCACTCACGCGATATTGCTGGATCGGTCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC
AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTACGCAGGCTCATCAAACAACGC
TTTTGAGCTTTCTTCAGGATTTGGCCCGAACTGTTTGGCAGATTCCCACGCGTTACGCACCTGTTCGCCACTTTGTTCTCAACTATTCCGATTCCAGCAA
AGGGAGGCCGTTAGGTCAAAGCCGTAGCGCGCGCCCTGTAGTTTTGAAGCAGGGCGAGACAACTTTAGCTAGGAGCCTCTTTTCCTTCTGCCCAGCTCCC
CGAAAACAACGTTCGACTTGCATGTGTTAAGCATATAGCTAGGGTTCCTT