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Detailed information on CNT30659540


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0D3N0|PER2_ORYSJ, E-value = 1e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695083Triticum dicoccoidesOryza sativa31.0921.7689.19111forward
CNT30671966Triticum dicoccoidesSetaria viridis49.353.6681.25176forward
CNT30179690Triticum dicoccoidesSecale cereale78.1597.5592.83279forward
CNT30221499Triticum dicoccoidesHordeum vulgare47.0657.7384.52168forward
CNT30554321Triticum dicoccoidesOryza glaberrima34.1725.184.43122forward
CNT30348949Triticum dicoccoidesEragrostis tef16.5327.8386.4459forward
CNT30596630Triticum dicoccoidesOryza meridionalis94.6844.0180.47338forward
CNT30370682Triticum dicoccoidesOryza glumipatula89.9239.7381321forward
CNT30102748Triticum dicoccoidesOryza rufipogon88.5241.3181.33316forward
CNT30577207Triticum dicoccoidesOryza barthii89.9236.7380.69321forward
CNT30117253Triticum dicoccoidesOryza nivara50.4224.184.44180forward
CNT30604331Triticum dicoccoidesOryza punctata94.6849.0680.77338forward

Expression of CNT30659540

Peptides detected in this lncRNA

>peptide 1 (47 aa)
PDLALRASQRAEVPHLHHGRGEGAAERRWGACEVVDDVVGAAAGARE*

>peptide 2 (46 aa)
MAEAKALLNAAGVLAKLLTMLSVPPPVPVNRTWSECRSPFWDLRLL*

Sequence

>CNT30659540
CCTGACCTGGCCCTGAGAGCCAGTCAACGGGCTGAGGTTCCCCATCTTCACCATGGCCGAGGCGAAGGCGCTGCTGAACGCCGCTGGGGTGCTTGCGAAG
TTGTTGACGATGTTGTCGGTGCCGCCGCCGGTGCCCGTGAATAGGACCTGGTCGGAGTGCAGGAGCCCCTTCTGGGACTTGAGGTTGCTGTAGTAAGCGT
TGTCAAAGGAGTATGGGGTCGACACGTCCAGATTGGCCAGGTTGCGGTCGCCGGAGCCGGTCGGCTGGGGGCAGTTGGCTTTGAGCGACGTCGCGAAGCC
GGAGTTGATGTTGGTCTCGTTGTAGAGTCTGTCCCTGAAGTTCTGGCACTGCGCCTG