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Detailed information on CNT30659506


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40459|PSBO_TOBAC, E-value = 3e-104

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525147Triticum dicoccoidesPhaseolus vulgaris24.6234.4880.09211forward
CNT30584070Triticum dicoccoidesEchinochloa crusgalli58.2342.3689.78499forward

Expression of CNT30659506

Peptides detected in this lncRNA

>peptide 1 (51 aa)
LDCFLSNDQPTYACTQDEHLHFCSALVRLELRVPHTLDLDILGRLGAEVGV*

>peptide 2 (62 aa)
MSDCREQVILAPASTPNARATCDDGRAEEARPPILAGISVAAAWRDAAMLVGGLARGRIDPTR

>peptide 3 (32 aa)
MLPVEEDAFFTFSLANSSSSPLPPAGSATALS*

Sequence

>CNT30659506
CTCGATTGTTTCCTCTCCAACGATCAACCCACGTACGCATGCACACAAGATGAGCATCTTCACTTCTGCTCTGCTCTAGTTAGACTCGAGCTGCGCGTAC
CACACACCCTGGATCTTGACATCCTTGGGCGCCTTGGCGCCGAGGTCGGTGTCTGACGGCTGCACGCTCTCGAAGACGCCGATCACCTCGCCGGTCTCCG
GCTTGCTCTTGGTCACGCTGAGCGTGATGTTGCCCGTGGAGGAGGACGCGTTCTTCACGTTCTCCTTGGCCAACTCCTCCTCGTCTCCTCTGCCTCCGGC
GGGTAGCGCCACGGCGTTGTCGTAGCCAGTAGAGCCACCACGGCCCTTTGGGTCGAGGAAAGACGAACCCCTGTAGCTGGGCACAAGGAAGGGCCCGCCG
AAGCTCTCGGGCTTGCCGGTGGCGACGAGCTGCTTGACGGTGAAGAGGAAGGGCACGCGCTCGCCTCCGGGGAGCTGCACGGTGACGGCCGCATAGTCGA
TGCCGTCCTTCTCCTCGAACTTGAGGGTGCCGTCGGCGCCGACCTCGAGCGGGCCTTCCATCTCGTCAAGGGTGTAGGTCTTGCTCTGGATCTCGTCGAA
GGGCAGAGGTGGCGAGGGCGAAGCCGGCCATCTTGGCGGCGTCGGCGCACTTGCTTGCGACCTCCCTGATGTCGGACTGCAGGGAGCAGGTGATCCTGGC
GCCAGCGTCGACGCCGAACGCCCGGGCGACGTGCGACGACGGCCGCGCGGAGGAGGCCCGGCCGCCGATCTTGGCCGGCATCAGCGTAGCCGCGGCTTGG
AGAGACGCTGCCATGTTGGTCGGTGGCTTGGCACGCGGGAGGATCGATCCCACTCGT