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Detailed information on CNT30659185


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZP9|CP122_ARATH, E-value = 1e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674439Triticum dicoccoidesSetaria viridis24.254.8992.25129forward
CNT30523223Triticum dicoccoidesSetaria italica43.5346.5987.07232forward
CNT30515591Triticum dicoccoidesJuglans regia26.2726.9781.43140forward
CNT30617555Triticum dicoccoidesSesamum indicum24.0221.2684.38128forward
CNT30729972Triticum dicoccoidesCorchorus capsularis25.1423.2685.82134forward
CNT30710175Triticum dicoccoidesGlycine max22.3330.0584.87119forward
CNT30387749Triticum dicoccoidesTriticum turgidum10083.6799.81533forward
CNT30586289Triticum dicoccoidesMusa acuminata19.1435.9294.12102forward
CNT30246479Triticum dicoccoidesAvena sativa45.0336.0993.33240forward
CNT30134237Triticum dicoccoidesLolium perenne44.843893.31239forward
CNT3015512Triticum dicoccoidesZea mays44.0927.3381.28235forward
CNT30216686Triticum dicoccoidesKalanchoe fedtschenkoi36.0233.4585.42192forward
CNT30620908Triticum dicoccoidesCajanus cajan25.1418.8789.55134forward
CNT30580322Triticum dicoccoidesEchinochloa crusgalli27.3927.6591.78146forward
CNT30497736Triticum dicoccoidesDigitaria exilis43.1533.1485.65230forward
CNT30557621Triticum dicoccoidesPanicum hallii41.4640.2688.69221forward

Expression of CNT30659185

Peptides detected in this lncRNA

>peptide 1 (29 aa)
VCNINCISTTYVPGKIFGAFLLHTSRSCK*

>peptide 2 (59 aa)
SVISIVYQPRMSLGKYLARFYYIHPDRVSNGRLRHSRFSRAPMSQEHHVHLHYPPSRTN*

Sequence

>CNT30659185
CGTCTGTAATATCAATTGTATATCAACCACGTATGTCCCTGGGAAAATATTTGGCGCGTTTTTACTACATACATCCCGATCGTGTAAGTAACGGTAGGTT
GAGACATAGTAGGTTTTCTCGGGCTCCCATGAGCCAAGAACACCACGTCCACCTTCACTATCCGCCGTCCAGAACAAATTAGCACGTACGCTCAGCTGTC
GTAGGTGCGGCACTCGTCGGTCTCGGGGTTCTCCTTGCAGTAGTTCTCGAGCGGGTCGGAGTCCTTGAGCTTGTCCCGGGCGTGGCTGGCGGCGGCGCTG
AGCTCCTCCACCTCGTCCCACGCCGCCGCGCACTCCCCGCTGGCGGCGTCCTCCAAGCACGTCTCCTGGGCCTCCTTGATGCTGTCCGACATCTTGTCGG
AGATGCCCGGCGGCGTGGCCTGGCGAGGACGTCGCCCCTGGCCGTGGGCGCGAAGGTAGACAGGCTCACGTTGGTGAGCGCGGACGCCATTGCAGGGTGT
GGTGGATCGACGGAGATTTTATGTGGTTAGGCT