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Detailed information on CNT30658923


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673229Triticum dicoccoidesSetaria viridis4.528.992.0663reverse complement
CNT30180742Triticum dicoccoidesSecale cereale17.240.3789.21241forward
CNT30300936Triticum dicoccoidesTriticum aestivum23.9196.2693.43335forward
CNT30387445Triticum dicoccoidesTriticum turgidum70.0966.2299.69982forward

Expression of CNT30658923

Peptides detected in this lncRNA

>peptide 1 (71 aa)
LPLTPRPNPSHALLHVPPPPSISPNTIVALLHEPDPHLLWLPFHSLSREGRDGRLTASAPGFRTPTPLHLL*

>peptide 2 (54 aa)
SLSPLVQTLATPSSMCRRPHRFRPTPSSLSSMSRIPTSFGSPSTHSPVKAEMDV*

>peptide 3 (89 aa)
MRRKTSSGSRSGHDDDHPVREGPPDLRQPRQPHRRGHIDIMKLLLGKGVDVESESESGTPLVWAAGHGQQDAVKLLIEHNAKVSMKLWS*

Sequence

>CNT30658923
CTCCCTCTCACCCCTCGTCCAAACCCTAGCCACGCCCTCCTCCATGTGCCGCCGCCCCCATCGATTTCGCCCAACACCATCGTCGCTCTCCTCCATGAGC
CGGATCCCCACCTCCTTTGGCTCCCCTTCCACTCACTCTCCCGTGAAGGCCGAGATGGACGTTTGACGGCCTCGGCTCCCGGATTCCGCACACCCACTCC
ACTCCATCTGCTCTGATCTGATTCGATCTCGGCTTCCTCCCCAAGCCATGCGACGCAAGACCAGTTCCGGCTCCCGCTCCGGCCATGACGACGACCATCC
AGTCCGTGAAGGCCCACCAGATCTTCGACAGCCGCGACAACCCCACCGTCGAGGACACATTGATATTATGAAGCTTTTGCTTGGTAAGGGAGTCGATGTC
GAATCCGAAAGCGAGTCAGGTACTCCCCTTGTTTGGGCCGCTGGTCATGGACAGCAAGACGCGGTCAAGCTTCTGATTGAACACAATGCTAAGGTGTCTA
TGAAGCTTTGGAGCTGAGGGACGGTGGATCTGACTACTTGCGCTAGGGTGTTTTGAAGGTTTACATTCGTTTGACTGAATTATACACTACCGTAGAATTC
TACACCATGTGGTGGACTTAAGTATCTTAGTGACTTCATTTGATGTGTGTATTTCTGTTAATTTTAAGCTTCTGTTGCTCTGAAAATGTACCTCACTGAC
CGTTTGTCTATTTATTGTGTACTTCTTGCATGAGGATGTGACTAGTGATGCGGCGCGCCAAGAAGTAGTAGGGGAAGGGGGTCTCCTGCTCGAGGAGGTG
GAGTAGGGGCGTGCCCAGCTGGCAGCCTTGTACTGCTCGTGGGGGAGGGGCAGGAGGGGTCTGCTCCCCTGCTTCCATTGCGACCGCGGCAGGAGCAACG
TTGCTGATGGCGATGGGTACGTGATGGTGGCTGGTATGGTGGACGACCCAGAATATGTGGCCTCGCAAGTGCACATGTCGTAGCTTTCCTCCTCAAATGC
TTCTGTTTCTGCCTCAGCTACTAAGCCAATAAACACCAAATCTGGAATAAGAAAGAGGATGAGGCCTACTTGATTGGTGTTTTAACCATTTTGTTTGTTC
ATGTTGTGTGCATTGATTCCCATGAACTATAACCTGATTTGATGCCACCTTGTCTTTTTTCAACTTGCAAGGACTAAGGATGTAAAGAAAACTAATTTTG
TCGCTCGTAGAGAATTGTATTTATTGTTGACAATGCTGTGTAATTAGAATACCTGATTGTCTTTTGTAACTTAATTTCCTTGCATTTTCAACTCTGATTT
TGAACGATTAAGGTTACTCTCATGAACAATTTTGCTAAGCATTTATCACATCTTCTTAAGTGTACCATAATGCATATTTTGTTTACCTTTTTAGATCTTT
T