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Detailed information on CNT30658905


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 5e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30386685Triticum dicoccoidesTriticum turgidum10047.3899.12569forward

Expression of CNT30658905

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHAPQPMFVQTQIIWNEKYALVGKQSRGQK*

>peptide 2 (55 aa)
PRAPLDFSIDFSLEFTYACSTTYVRTNTDHMEREICSGRKAESWTKVKFTNDHHT*

>peptide 3 (51 aa)
APSPSRLQYRFFARIYICMLHNLCSYKHRSYGTRNMLWSESRVVDKSEVHK*

Sequence

>CNT30658905
GCCCCGAGCCCCTCTCGACTTCAGTATAGATTTTTCGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAACACAGATCATATGGAACGA
GAAATATGCTCTGGTCGGAAAGCAGAGTCGTGGACAAAAGTGAAGTTCACAAATGACCATCATACATAGGCCATTGTTTCAACTTGTAGTTTAGGCCTTG
CCGGACTCCTCGCAACCTGGTGGCCTGAAGGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGT
ACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGACCATCGTAGTA
CCCGGGGGAGCTGTTGTGCTCACGGAAAACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAAGTAGTCGACCTGCTTCAGG
AGGGCCTCCGTGGAGAGGGGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATTGGCC