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Detailed information on CNT30658785


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674586Triticum dicoccoidesSetaria viridis28.3322.8892100forward
CNT30287995Triticum dicoccoidesTriticum aestivum97.7390.7995.94345forward
CNT30552083Triticum dicoccoidesOryza glaberrima28.3315.2790100forward
CNT30580142Triticum dicoccoidesEchinochloa crusgalli26.9122.4692.6395forward

Expression of CNT30658785

Peptides detected in this lncRNA

>peptide 1 (59 aa)
SVISIVYQPRMSLGKYLARFYYIHPDRVSNGRLRHSRFSRAPMSQEHHVHLHYPPSRTN*

>peptide 2 (29 aa)
VCNINCISTTYVPGKIFGAFLLHTSRSCK*

Sequence

>CNT30658785
CGTCTGTAATATCAATTGTATATCAACCACGTATGTCCCTGGGAAAATATTTGGCGCGTTTTTACTACATACATCCCGATCGTGTAAGTAACGGTAGGTT
GAGACATAGTAGGTTTTCTCGGGCTCCCATGAGCCAAGAACACCACGTCCACCTTCACTATCCGCCGTCCAGAACAAATTAGCACGTACGCTCAGCTGTC
GTAGGTGCGGCACTCGTCGGTCTCGGGGTTCTCCTTGCAGTAGTTCTCGAGCGGGTCGGAGTCCTTGAGCTTGTCCCGGGCGTGGCTCACGTTGGTGAGC
GCGGACGCCATTGCAGGGTGTGGTGGATCGACGGAGATTTTATGTGGTTAGGC