« Back to Triticum dicoccoides search


Detailed information on CNT30658689


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 2e-74

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287828Triticum dicoccoidesTriticum aestivum62.0753.7997.29553forward
CNT30386363Triticum dicoccoidesTriticum turgidum59.0374.6197.34526forward

Expression of CNT30658689

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHAPQPMFVQTQIIPNEKYALVGKQSPGQK*

>peptide 2 (37 aa)
SIAVPNKESFPRINSRTMVRLLYIINITLVLYMCSRC*

>peptide 3 (44 aa)
MLHNLCSYKHRSYRTKNMLWSESRVLDKSEVHKRQSYIGHCFNS*

Sequence

>CNT30658689
ATCCATTGCAGTGCCAAATAAAGAAAGTTTTCCGAGAATTAACAGCAGGACAATGGTCCGCTTGTTGTATATAATAAATATCACACTGGTGTTGTATATG
TGTAGCCGGTGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAACACAGATCATACCGAACGAAAAATATGCTCTGGTCGGAAAGCAGA
GTCCTGGACAAAAGTGAAGTTCACAAAAGACAATCATACATAGGCCATTGTTTCAACTCGTAGTTTAGGCCTTGCCAGACTCCTCGCAACCCGGTGGCCT
GAATGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCG
TTGAGCACCTGCGTGGCGTCGTTTAGGCCTTGCCAGACTCCTCGCAACCCGGTGGCCTGAAGGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTC
GAAGCCGATGACGCGGACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTTGTCGAAGCCGATGACGCG
GACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAG
TATCGACCGTCGTAGTACCCGGGGGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAGGT
AGTCGACCTGCTTAAGGAGGGCCTCCGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCAAACTTCTTGATGCCCTCAATCGGCCACACCTG