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Detailed information on CNT30658545


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30459719Triticum dicoccoidesSaccharum spontaneum17.6631.8788.7580forward
CNT30722600Triticum dicoccoidesTriticum spelta72.1973.9891.74327forward

Expression of CNT30658545

Peptides detected in this lncRNA

>peptide 1 (52 aa)
YKYRDHGSSLRRVCCHCVPTSSELRRSNVGNVRLISPPSGLNGPSGLDLFPP*

>peptide 2 (34 aa)
LTNTEIMGHRCGECAATAYQQVRSFDAVTSGMLG*

Sequence

>CNT30658545
CTTACAAATACAGAGATCATGGGTCATCGTTGCGGAGAGTGTGCTGCCACTGCGTACCAACAAGTTCGGAGCTTCGACGCAGTAACGTCGGGAATGTTAG
GTTGATCTCTCCACCGAGCGGGCTCAACGGCCCATCGGGCCTTGATCTATTCCCGCCCTGATCGGGGGCGCCGAACCCTCTTATGGCTGGTGGGCCCCTG
TGACCTGCGATATATAGAGAGGTGGGGGCCGGGGCACACGGTACAAGGTTAACCGTGCCGCCAGACTCCCCACCGAAATCCCTTCCGATCTAGGGCAATC
GCAGTGCTCACGGGAAGCACCACTGCCACCTCTCCATCTCGATCTCTCTGCTATCACTGGCCCCTACTTCACCATGGCCGGAGCTGGATCGAGCTCATCC
GCACCCAAAGAAGGTAGGTTTACCGGATGATCTAGCCTACCCCGATCCAAAGG