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Detailed information on CNT30658371


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0D3D2|PDC3_ORYSJ, E-value = 2e-99

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553156Triticum dicoccoidesOryza glaberrima26.1826.3882.63167forward
CNT30369917Triticum dicoccoidesOryza glumipatula39.9742.1582.35255forward
CNT30100594Triticum dicoccoidesOryza rufipogon23.24081.76148forward

Expression of CNT30658371

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MLTRLASPDRKSFIMTHPNVGPLPTVTRSGCTITAFSLLSRNEYPTELWSLKMGPAMRYASADSTISTQDDVLTAPQ*

>peptide 2 (70 aa)
MNRGSVSGTSPFADGIVATAYPLANAAAALATRSFGSATMTGFTALLRNSTVASSAASSPIWLLCLGTMQ*

Sequence

>CNT30658371
TTGTAGTTGTCGAATGCCGTGGTGTTCCTCTTCATGCTCACGCGCTTGGCTAGCCCCGACAGGAAGTCCTTCATCATGACGCACCCGAACGTCGGGCCGT
TGCCGACGGTGACGCGCTCGGGCTGCACAATCACCGCCTTCTCCTTGTTGAGCAGGAACGAGTACCCCACGGAGCTCTGGTCGTTGAAGATGGGGCCGGC
GATGAGGTACGCGTCCGCCGACTCCACCATCTCCACGCAGGACGACGTGCTGACCGCGCCCCAGTAGGTCCCGATGAACCGCGGCAGCGTCTCCGGCACC
AGCCCCTTCGCCGACGGCATCGTCGCCACCGCGTACCCGCTCGCGAACGCCGCGGCCGCCTTGGCCACCCGGAGCTTCGGCTCCGCCACCATGACCGGCT
TCACTGCCTTGCTGAGGAACTCCACCGTCGCATCCAGCGCCGCCTCGAGTCCCATCTGGCTGCTCTGCCTCGGGACGATGCAGTAGGGGATGGGGTTGCC
GAAGAAGGTGGGGTGGGAGACGCCAGGGAGGTTGCAGGCGACGCTGATGTAGACGGGCTTGCTCTCCCTGAGAGCCGTCGCGATGGCCTTATCGACCTGC
TCGTGAGCGTCGTCCAGGTTGTTGATGACGACCTGGTG