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Detailed information on CNT30658331


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 1e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30387142Triticum dicoccoidesTriticum turgidum94.2852.6896.81659forward
CNT30251828Triticum dicoccoidesAvena sativa68.6757.0187.5480forward

Expression of CNT30658331

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHAPQPMFVQTQIIPNEKYALVGKQSPGQK*

>peptide 2 (58 aa)
WCCICVAGARIYICMLHNLCSYKHRSYRTKNMLWSESRVLDKSEVHKRQSYIGHCFNS*

Sequence

>CNT30658331
CTGGTGTTGTATATGTGTAGCCGGTGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAACACAGATCATACCGAACGAAAAATATGCTC
TGGTCGGAAAGCAGAGTCCTGGACAAAAGTGAAGTTCACAAAAGACAATCATACATAGGCCATTGTTTCAACTCGTAGTTTAGGCCTTGCCAGACTCCTC
GCAACCCGGTGGCCTTGCCAGACTCCTCGCAACCCGGTGGCCTGAAGGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCG
GACATAGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGG
GTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGACCGTCGTAG
TACCCGGGGGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAGGTAGTCGACCTGCTTAA
GGAGGGCCTCCGTGGAGAGGGGTGGCAAGTAAGACAGGGTCTCAAACTTCTTGATGCCCTCAATCGGCCACACCTGAATAGATGGAATTAACACAATTG