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Detailed information on CNT30658265


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 7e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30720492Triticum dicoccoidesTriticum spelta40.7461.6397.1310forward

Expression of CNT30658265

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MHAPQPMFVQTQIIPNEKYALVGKQSPGQK*

>peptide 2 (61 aa)
ISHWCCICVAGARIYICMLHNLCSYKHRSYRTKNMLWSESRVLDKSEVHKRQSYIGHCFNS*

Sequence

>CNT30658265
AAATATCACACTGGTGTTGTATATGTGTAGCCGGTGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAACACAGATCATACCGAACGAA
AAATATGCTCTGGTCGGAAAGCAGAGTCCTGGACAAAAGTGAAGTTCACAAAAGACAATCATACATAGGCCATTGTTTCAACTCGTAGTTTAGGCCTTGC
CAGACTCCTCGCAACCCGGTGGCCTGAATGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTA
CTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGCGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGGCCGTCGTAGTAC
CCGGGGGAGCTGTTGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTACTCCTTCTTGACCTC
CTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGACCGTCGTAGTACCCGGGGGAGCTGTTG
TGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAGGTAGTCGACCTGCTTAAGGAGGGCCTCCGTGGAGA
GGGGTGGCAAGTAAGACAGGGTCTCAAACTTCTTGATGCCCTCAATCGGCCACACCTGAAT