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Detailed information on CNT30658047


BLAST search results

BLAST vs Swiss-Prot:
sp|O49079|PSBO_FRIAG, E-value = 2e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515312Triticum dicoccoidesJuglans regia22.4511.2581.25176forward
CNT309111Triticum dicoccoidesZea mays44.1347.1490.46346forward

Expression of CNT30658047

Peptides detected in this lncRNA

>peptide 1 (54 aa)
CTLSKTPITSPVSGLLLVTLSVMLPVDEDAFFTFSLANSSSSPLPPAGSATALS*

>peptide 2 (50 aa)
MSLVFWKAGGSFFWMPSALTVKEVLLWISSKVSLLGAPSALAPCTHAWQR*

>peptide 3 (48 aa)
LHALEDTDHLAGLRLALGHAERDVARGRGRVLHVLLSQLLLVSSASGR*

Sequence

>CNT30658047
CTGCACGCTCTCGAAGACACCGATCACCTCGCCGGTCTCCGGCTTGCTCTTGGTCACGCTGAGCGTGATGTTGCCCGTGGACGAGGACGCGTTCTTCACG
TTCTCCTTAGCCAACTCCTCCTCGTCTCCTCTGCCTCCGGCAGGTAGCGCCACGGCGTTGTCGTAGCCAGTAGAGCCACCACGGCCCTTTGGCTGGGCAC
GAGGAAGGGCCCGCTGAAGCTCTCGGGCTTGCCGGTAGCGACGAGCTGCTTGACGGTGAAGAGGAAGGGCACTCGCTCGCCTCCGGGGAGCTGCACGGTG
ACGGCCGCGTAGTCGATGCCGTCCTTCTCCTCGAACTTGAGGGTGCCGTCGGCGCCGACCTCGAGCGGGCCTTCCATCTCGTCAAGGGTGTAGGTGAGAC
GGGTCATGAGCTTGGTTTTCTGGAAGGCCGGCGGCTCGTTCTTCTGGATGCCCTCGGCCTTGACGGTGAAGGAGGTCTTGCTCTGGATCTCGTCGAAGGT
CAGCCTCTTGGGCGCCCCCTCCGCGCTCGCGCCCTGCACCCACGCCTGGCAGAGGTGATCCTGGCGCCAGCGTCAACGCCGAACGCCCGGGCGACGTGCG
ACGACGGCCGCGCGGAGGAGGCCCGGCCGCCGATCTTGGCCGGCATCAGCGTGGCCGCGGCTTGGAGAGACGCTGCCATGTTGGTCGGTGGCTTGGTACG
CGGGAGGATCGATCCCACTCGTGGTTGAGAGGCGTGTTGTCAGGGCAGGCAAGTGTTATCTATGCGAGGCGCGGATAAGAGACG