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Detailed information on CNT30658045


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524257Triticum dicoccoidesSetaria italica20.3420.1185.9271reverse complement

Expression of CNT30658045

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MQKSTIPLQHPIKFALLYSTLCGLYVLVDALSCLFVFFCLRGRIW*

>peptide 2 (66 aa)
EWIGAFSSALAPASLWRQLSSIASQSLPRRSLVLNLSWSCKNLLYRCNTQLSLLYCILPYVVCMCW*

Sequence

>CNT30658045
GGAATGGATTGGGGCGTTCTCTTCGGCTTTGGCCCCGGCCTCACTGTGGAGACAATTGTCCTCCATAGCGTCCCAATCACTGCCTAGACGATCGCTTGTT
CTCAATTTATCTTGGTCATGCAAAAATCTACTATACCGCTGCAACACCCAATTAAGTTTGCTCTATTGTATTCTACCCTATGTGGTTTGTATGTGTTGGT
AGATGCACTCTCCTGTTTGTTTGTTTTTTTTTGCTTGAGAGGACGGATTTGGTAGGTGACAATTAGTTATGTCTCATGTAACTCTTATACCATAAGATGA
AAACGCTTGATGATTCATTTTTGTTTTGTGGGCTCATGTAGCGCATTTA