« Back to Triticum dicoccoides search


Detailed information on CNT30658022


BLAST search results

BLAST vs Swiss-Prot:
sp|P31093|PSAN_HORVU, E-value = 2e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697529Triticum dicoccoidesOryza sativa22.2214.5693.3360forward
CNT30180208Triticum dicoccoidesSecale cereale38.1524.4798.06103forward
CNT30221417Triticum dicoccoidesHordeum vulgare82.5936.9295.07223forward
CNT30385322Triticum dicoccoidesTriticum turgidum59.6347.21100161forward
CNT30436158Triticum dicoccoidesAegilops tauschii87.4179.1999.15236forward
CNT30252158Triticum dicoccoidesAvena sativa60.7442.9392.07164forward
CNT30137831Triticum dicoccoidesLolium perenne77.0448.2688.94208forward
CNT30680368Triticum dicoccoidesTriticum urartu9092.4100243forward
CNT30349480Triticum dicoccoidesEragrostis tef23.726.1293.7564forward
CNT30367109Triticum dicoccoidesSorghum bicolor24.8117.2789.5567forward
CNT30104555Triticum dicoccoidesOryza rufipogon22.228.2393.3360forward
CNT30551854Triticum dicoccoidesOryza brachyantha21.488.2389.6658forward

Expression of CNT30658022

Peptides detected in this lncRNA

>peptide 1 (89 aa)
LLLGEVLVEDACPGRPGGGGRDGEDGRQAEKRRPPVLGRGDLHALCRRRRGGLRHRRGGLEADHTGVHAGHDPLEVFLMNLVCVRVCGLR

>peptide 2 (77 aa)
FCLARYSSKTLALADPAEAAVTAKTAARPRSADRRSLAGATCTRFAAAGEADCGTAAAGLRPTTLVFTPAMILSRFS*

Sequence

>CNT30658022
CTTCTGCTTGGCGAGGTACTCGTCGAAGACGCTTGCCCTGGCCGACCCGGCGGAGGCGGCCGTGACGGCGAAGACGGCCGCCAGGCCGAGAAGCGCCGAC
CGCCGGTCCTTGGCCGGGGCGACCTGCACGCGCTTTGCCGCCGCCGGCGAGGCGGACTGCGGCACCGCCGCGGCGGGCTTGAGGCCGACCACACTGGTGT
TCACGCCGGCCATGATCCTCTCGAGGTTTTCTTGATGAATCTGGTGTGTGTGCGTGTGTGTGGCCTCAGG