« Back to Triticum dicoccoides search


Detailed information on CNT30657813


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180109Triticum dicoccoidesSecale cereale20.6735.2494.58203forward

Expression of CNT30657813

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLRGQIGYRIKYNASGKPLVLFPLGTSLQ*

>peptide 2 (29 aa)
IPMVLPCTVASCRLLLHLCSWCMVSPPKS*

>peptide 3 (54 aa)
DSHGPALYSSQLPLAVASVQLVHGLPSQIVVAAGSPFVHIIAHPGSHPFWLLWR*

>peptide 4 (32 aa)
MQVGNLWFCFLWVLHSNDCQGAPKKSDLVISG*

>peptide 5 (52 aa)
MICCLMPSLILSNASVRQINLLACELLKKYELEAEQVWKLVIILLEEDFVWQ*

Sequence

>CNT30657813
CGATTCCCATGGTCCTGCCTTGTACAGTAGCCAGCTGCCGCTTGCTGTTGCATCTGTGCAGCTGGTGCATGGTCTCCCCTCCCAAATCGTAGTCGCCGCC
GGCTCACCATTTGTCCATATCATTGCTCACCCCGGCTCCCATCCCTTCTGGTTGCTTTGGCGTTGATTGATTTTGGCGTCTACCCGTCTAGGGTTTCAAG
CTCAGCGTCGGCGTTTCAGCTTGCTGCCTCCCTTTGCCAGAACTATGGAATTTGAACTTACAGTTAAGTAATGCCACATCAGGTTTGCCAAAAGTATTAA
AATAGACATGGTGCATAGAAAAGCATGATTGCCCTATCACTATCAGTGTCATGAAAGTACTGAATCACATGGTAATATCTGCAACTTTATTTGACTGGGT
ATAATTCATACAATAAATGTTGAGAGGACAAATAGGTTATAGGATAAAATATAATGCAAGTGGGAAACCTTTGGTTTTGTTTCCTTTGGGTACTTCACTC
CAATGACTGTCAAGGTGCACCCAAAAAAAGTGACTTGGTGATATCAGGTTGAACATATATTTATACACCCCACATGATTTGTTGTCTTATGCCATCTCTA
ATTCTCTCAAATGCTTCTGTGAGGCAAATTAACCTTTTAGCATGTGAGCTTCTAAAGAAGTATGAGCTAGAGGCAGAACAGGTCTGGAAACTCGTTATTA
TCCTGCTGGAAGAAGATTTCGTGTGGCAGTAGAAGGTCTCACTTTGTCTCAGTTTGATTCAGAACTGTCATTTGGGGTTCATCTCACAAGTTTCAATATA
GACTGAAGGATTTGTATGTGTTGTACATGTTTCCTTAGCTTCCATTATTCCTTCTGAGAAGTTCTGTTATGTTGGTCTTACATATTTGATTTTCTGTCCG
AGGTTCAAAGGAGATTAGGATTCGGATAGGAGCTGTATGCACAAGAGCTCTTTTCAAATGGTTTCCTACATGAGAATTCCTA