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Detailed information on CNT30657665


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513690Triticum dicoccoidesJuglans regia27.212.9186.7583reverse complement
CNT30249262Triticum dicoccoidesAvena sativa26.892.9993.982forward
CNT30726123Triticum dicoccoidesLupinus angustifolius57.385.2896.57175reverse complement

Expression of CNT30657665

Peptides detected in this lncRNA

>peptide 1 (29 aa)
SGETNSQGVTGGVYRARVHIHRGMLIRDY*

>peptide 2 (31 aa)
MFPSCREQSELRQSFRIRSALQPCFPLSLPL*

Sequence

>CNT30657665
CTTCGGGCGAAACCAATTCCCAGGGTGTGACGGGCGGTGTGTACAGGGCCCGGGTACATATTCACCGCGGCATGCTGATCCGTGATTACTAGCGATTTCA
ACTTCATGTTCCCGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGGATTCGCTCCGCCTTACAGCCTTGCTTCCCATTGTCATTGCCATTGTA
GCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCACTGGCAGTCCCTCGTGAGTGCGGCACACAC
CTTTT