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Detailed information on CNT30657614


BLAST search results

BLAST vs Swiss-Prot:
sp|P00871|RBS1_WHEAT, E-value = 2e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30257738Triticum dicoccoidesAvena sativa74.8573.9685.6500forward

Expression of CNT30657614

Peptides detected in this lncRNA

>peptide 1 (61 aa)
ISHWCCICVAGARIYICMLHNLCSYKHRSYRTKNMLWSESRVLDKSEVHKRQSYIGHCFNS*

>peptide 2 (30 aa)
MHAPQPMFVQTQIIPNEKYALVGKQSPGQK*

Sequence

>CNT30657614
AAATATCACACTGGTGTTGTATATGTGTAGCCGGTGCTAGAATTTACATATGCATGCTCCACAACCTATGTTCGTACAAACACAGATCATACCGAACGAA
AAATATGCTCTGGTCGGAAAGCAGAGTCCTGGACAAAAGTGAAGTTCACAAAAGACAATCATACATAGGCCATTGTTTCAACTCGTAGTTTAGGCCTTGC
CAGACTCCTCGCAACCCGGTGGCCTGAATGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACGCGGACATAGGCGTCAGGGTA
CTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGCGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTATCGGCCGTCGTAGTAC
CCGGGGGAGCTGTTGTGCTCACGAAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGCTTCCACATTGTCCAGTATCGACCGTCATAGTATCCGGGGGAG
CTATTGTGCTCACGGAAGACGAAACCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAAGTAGTCGACCTGCTTCAGGAGGGCCTCCG
TGGAGAGGGGTGGCAGGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGAATG