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Detailed information on CNT3065708


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693619Selaginella moellendorffiiOryza sativa37.1820.3886.82129forward
CNT30675823Selaginella moellendorffiiSetaria viridis37.1829.7286.82129forward
CNT30523103Selaginella moellendorffiiSetaria italica36.8918.9384.38128forward
CNT30315505Selaginella moellendorffiiCorylus avellana42.9432.686.58149forward
CNT30518188Selaginella moellendorffiiJuglans regia36.8914.5389.06128forward
CNT30702570Selaginella moellendorffiiQuercus lobata37.1825.887.6129forward
CNT30618876Selaginella moellendorffiiSesamum indicum37.187.9389.92129forward
CNT3072231Selaginella moellendorffiiQuercus suber26.816.490.3293forward
CNT30379403Selaginella moellendorffiiManihot esculenta33.4320.6481.03116forward
CNT30526697Selaginella moellendorffiiPhaseolus vulgaris36.8948.6785.94128forward
CNT30632073Selaginella moellendorffiiVigna unguiculata36.8917.0285.94128forward
CNT30200086Selaginella moellendorffiiPisum sativum37.7524.5885.5131forward
CNT30179138Selaginella moellendorffiiSecale cereale36.8915.8685.94128forward
CNT30301816Selaginella moellendorffiiTriticum aestivum36.8918.4286.72128forward
CNT30220711Selaginella moellendorffiiHordeum vulgare36.8912.3685.94128forward
CNT30395424Selaginella moellendorffiiTriticum turgidum36.8926.6185.16128forward
CNT30565715Selaginella moellendorffiiActinidia chinensis42.9418.9887.92149forward
CNT30586986Selaginella moellendorffiiMusa acuminata31.4130.7981.65109forward
CNT3086649Selaginella moellendorffiiVigna radiata36.0216.7684.8125forward
CNT30552407Selaginella moellendorffiiOryza glaberrima37.1818.5986.82129forward
CNT30171046Selaginella moellendorffiiTrifolium pratense36.0235.2180.8125forward
CNT30437440Selaginella moellendorffiiAegilops tauschii36.8925.0585.94128forward
CNT30240867Selaginella moellendorffiiAvena sativa36.8918.0885.94128forward
CNT30666604Selaginella moellendorffiiTriticum dicoccoides36.8924.2986.72128forward
CNT30597299Selaginella moellendorffiiFraxinus excelsior32.2820.484.82112forward
CNT30447591Selaginella moellendorffiiSaccharum spontaneum36.8923.4985.16128forward
CNT30130711Selaginella moellendorffiiLolium perenne35.4518.0985.37123forward
CNT303693Selaginella moellendorffiiZea mays36.8937.185.16128forward
CNT30606042Selaginella moellendorffiiGossypium raimondii36.8941.9785.94128forward
CNT30231835Selaginella moellendorffiiAnanas comosus33.4317.8588.79116forward
CNT30205622Selaginella moellendorffiiHelianthus annuus29.3937.7882.35102forward
CNT30129800Selaginella moellendorffiiCorymbia citriodora36.8915.989.84128forward
CNT30681751Selaginella moellendorffiiTriticum urartu36.8920.4185.94128forward
CNT30722188Selaginella moellendorffiiTriticum spelta36.8918.7486.72128forward
CNT30346527Selaginella moellendorffiiEragrostis tef30.8450.7184.11107forward
CNT30363575Selaginella moellendorffiiSorghum bicolor34.2912.9184.87119forward
CNT30619778Selaginella moellendorffiiCajanus cajan37.1819.4989.92129forward
CNT30596761Selaginella moellendorffiiOryza meridionalis37.1816.3383.72129forward
CNT30369782Selaginella moellendorffiiOryza glumipatula37.1820.2584.5129forward
CNT30570929Selaginella moellendorffiiVitis vinifera36.8919.0884.38128forward
CNT3052765Selaginella moellendorffiiAmborella trichopoda36.8925.283.59128forward
CNT30327286Selaginella moellendorffiiAsparagus officinalis36.3113.9488.1126forward
CNT30101075Selaginella moellendorffiiOryza rufipogon38.6219.1283.58134forward
CNT30574682Selaginella moellendorffiiOryza barthii37.1818.8686.82129forward
CNT30496069Selaginella moellendorffiiDigitaria exilis36.8916.0485.16128forward
CNT30176425Selaginella moellendorffiiVigna angularis36.8915.2784.38128forward
CNT30557628Selaginella moellendorffiiPanicum hallii34.2921.3683.19119forward
CNT30114697Selaginella moellendorffiiEutrema salsugineum36.3120.5584.92126forward

Expression of CNT3065708

Peptides detected in this lncRNA

>peptide 1 (95 aa)
ASFSKMSLMKLFMIPMALLEMPVSGWTCLSTLYMYILYVSTLFFILRFFLSAAADGSLAGVFFSARGFFSAALAIAPPLGNPRERETERKRGSAY*

>peptide 2 (59 aa)
MDPWPGSSSPPAASSPLPWPSLRRLGIRERERQREREALPTDLRASATTYSSRTHQEDCS

Sequence

>CNT3065708
GCGCTAGCTTCTCGAAGATGTCGTTGATGAAGCTGTTCATGATCCCCATGGCCTTGCTCGAAATGCCCGTCTCGGGGTGGACCTGCTTGAGTACCTTGTA
TATGTACATCTTGTACGTCTCCACGCTCTTCTTCATCTTGCGCTTCTTCTTGTCCGCCGCCGCCGATGGATCCTTGGCCGGGGTCTTCTTCTCCGCCCGC
GGCTTCTTCTCCGCTGCCTTGGCCATCGCTCCGCCGCTTGGGAATCCGAGAGAGAGAGAGACAGAGAGAAAGAGAGGCTCTGCCTACTGATTTGAGAGCT
AGCGCTACCACTTACTCCTCTCGCACACACCAGGAAGATTGCTCGCC