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Detailed information on CNT30656927


BLAST search results

BLAST vs Swiss-Prot:
sp|P05621|H2B2_WHEAT, E-value = 3e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702570Triticum dicoccoidesQuercus lobata23.1326.689.47133forward
CNT30220711Triticum dicoccoidesHordeum vulgare67.4837.4595.36388forward
CNT30721953Triticum dicoccoidesTriticum spelta53.0443.5195.08305forward

Expression of CNT30656927

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSLMKEFMMDMALEEMPMSGCTCFSTLKM*

Sequence

>CNT30656927
CAGCACAGAGAGGACCATTCCTACCACTAGTCGGAGATACATAAGCAGAGTCAGCGACCACTAACAGAAGAAAACAGCAGCCAACTACATCTGTCATAAC
AAGCGACGCAGCGTCAGTCTAAGAGGAGGTGAACTTGGTGACAGCCTTGGTGATGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCGCCGGCG
AGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTCAGCACCTTGAAGATGT
AGATCTTGTACGTCTCCACGCCCTTCTTCGCCTTGCTGCCCTTCTTCCGGCCCCTCGTCTTGGCCTCGCCGCCGGCCTCCTTGGACGCCGTCTTGCCTGC
CGGCAGCCGCTTCTCGGCCTTGGGCTTCTTGCCCGCGGGGGTCTTCTCCGCCGCTTTCTCGACCTTGTTCTCGGCGGCCGGCTTCTTGTCTGCCTTGGGG
GCCATGGCTGCCGCTGGAGCTTCGAAGGTGGAAGTGGGAGTGAGGGACGAGGTGTTTGGCTCGGAGGTGGGGAAT