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Detailed information on CNT30656522


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 2e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695884Triticum dicoccoidesOryza sativa70.358.6392.93523forward
CNT30285424Triticum dicoccoidesTriticum aestivum61.9664.7599.13461forward
CNT3010578Triticum dicoccoidesZea mays62.2374.9294.17463forward
CNT30103295Triticum dicoccoidesOryza rufipogon70.8343.3490.7527forward

Expression of CNT30656522

Peptides detected in this lncRNA

>peptide 1 (92 aa)
MVVVQTKPSCMHACMRTLDRVRTYVHGRFPDTTQHLAAYLPGTKLVAKAQALLLTGSARWSARRPFLISFTLSSANASGSSARPRGSKLPPG*

>peptide 2 (29 aa)
MAHRQWITSSSRFLAKVSGSAESPAVSHP*

Sequence

>CNT30656522
CATGGTTGTAGTACAAACGAAACCCAGCTGCATGCACGCATGCATGCGCACACTTGATCGCGTACGTACGTACGTGCACGGTCGGTTTCCAGACACAACA
CAACACCTAGCAGCTTACTTGCCGGGCACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCGAGGCGGCCGTTCT
TGATCTCCTTCACCTTGAGCTCCGCGAACGCCTCGGGGTCGTCAGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAGAGCGGGTCGACGATCTCGCC
GAGCGGGCCGCCGGCGACGCGGTAGCCCTCGACGGCGCCCATGAGCACGACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGGACGAGGCTGGGG
TTGCCAAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCACACGGCCTCGCCGAACTTAACGCCGTTGCGGGCGAGCAGCTCCG
GGAAGACGCAGCCGAGCGCGCCCAGCATGGCCCACCGGCAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCAGCCGAGAGCCCCGC
GGTGTCCCATCCGTAGTCGCCGGGGAACTCACCGGTGAGGTAGCTCGGGGGAGCGCCATCGCGGTGGTCGCCATTGCTCGCTGGTCGAGGAGACTTCGTG
CGTGTCCAATGTGCGTGCTCTCTAGGAGTGGGGCTGTGGTGGTG