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Detailed information on CNT30656303


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30444210Triticum dicoccoidesAegilops tauschii79.2355.7199.76820forward
CNT30110310Triticum dicoccoidesOryza longistaminata78.9471.7398.29817forward
CNT30117001Triticum dicoccoidesOryza nivara79.2351.998.41820forward

Expression of CNT30656303

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLSQLFVFHKSKTFTSDYEIRMPPTVPINHYSDPEGQHNRTGIL*

>peptide 2 (53 aa)
MMLSHANVSRAMACFEHSNFFKVTMPETRPGQLRLGARCRPKGPTTSFLTATT*

>peptide 3 (32 aa)
MKYECPRLSLLIITPIPKANTIGPESYDVIPC*

>peptide 4 (39 aa)
MPAEGSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR*

Sequence

>CNT30656303
TCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACCAATTTGAACTGTGAAACTGCGAATGGCTCATTAAATCAGT
TATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGGAGGGGCGCATTTATTAG
ATAAAAGGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA
AGAAAGAGCTCTCAGTCTGTCAATCCTTGCTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACGCCTGGTGGTGCC
CTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAA
CATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATC
CTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGACTTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTATTAATCATTA
CTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGATGGCTTGCTTTGAGCACTCTAATTTCT
TCAAAGTAACGATGCCGGAAACACGACCCGGCCAATTAAGGCTAGGAGCGCGATGCCGGCCGAAGGGTCCAACTACGAGCTTTTTAACTGCAACAACTTA
AATATACGCTATTGGAGCTGGAATTACCGCGGCTGTTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTA
CCAGACACTAATGCGCCCGGTATTGTTATTTATTG