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Detailed information on CNT30656274


BLAST search results

BLAST vs Swiss-Prot:
sp|Q95H50|RK16_WHEAT, E-value = 2e-51

BLAST vs NONCODE:
NONSLYT000089, E-value = 3e-57

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693928Triticum dicoccoidesOryza sativa10011.9192.37498forward
CNT30641762Triticum dicoccoidesNymphaea colorata46.396.6688.74231forward
CNT30405603Triticum dicoccoidesBeta vulgaris5032.5989.56249forward
CNT30196572Triticum dicoccoidesPisum sativum47.7923.7181.93238forward
CNT3048584Triticum dicoccoidesPrunus dulcis43.1766.7787.91215forward
CNT30185636Triticum dicoccoidesSecale cereale10032.1398.59498forward
CNT30294378Triticum dicoccoidesTriticum aestivum10024.499498forward
CNT30224357Triticum dicoccoidesHordeum vulgare53.2117.5596.23265forward
CNT30540371Triticum dicoccoidesBrassica napus49.240.5687.35245forward
CNT30555950Triticum dicoccoidesOryza glaberrima10032.8792.37498forward
CNT30442098Triticum dicoccoidesAegilops tauschii10075.2399.2498forward
CNT30243771Triticum dicoccoidesAvena sativa100.643.4595.61501forward
CNT30311863Triticum dicoccoidesCamelina sativa4914.9487.7244forward
CNT3060130Triticum dicoccoidesArabidopsis lyrata48.1926.1787.92240forward
CNT3083474Triticum dicoccoidesBrassica juncea49.27.3487.35245forward
CNT30598237Triticum dicoccoidesFraxinus excelsior26.7121.6384.96133forward
CNT30447455Triticum dicoccoidesSaccharum spontaneum100.469.6491.4500forward
CNT30134355Triticum dicoccoidesLolium perenne61.0412.0797.04304forward
CNT30229832Triticum dicoccoidesAnanas comosus43.9818.6289.04219forward
CNT30655378Triticum dicoccoidesRosa chinensis56.4318.9288.97281forward
CNT30689030Triticum dicoccoidesTriticum urartu1001199.2498forward
CNT30620547Triticum dicoccoidesCajanus cajan24.538.8589.34122forward
CNT30357951Triticum dicoccoidesLactuca sativa5126.9987.4254forward
CNT30371107Triticum dicoccoidesOryza glumipatula53.8263.5189.55268forward
CNT30411335Triticum dicoccoidesPapaver somniferum48.828.1690.53243forward
CNT30574575Triticum dicoccoidesVitis vinifera50.216.3888.8250forward
CNT30585636Triticum dicoccoidesEchinochloa crusgalli46.794.0696.14233forward
CNT30604550Triticum dicoccoidesOryza punctata93.3721.2289.68465forward
CNT30550799Triticum dicoccoidesOryza brachyantha36.5513.5193.96182forward
CNT30336889Triticum dicoccoidesCynara cardunculus5129.6486.61254forward
CNT30724130Triticum dicoccoidesLupinus angustifolius27.1140.4288.89135forward

Expression of CNT30656274

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MIYQFSLNLIERGTISSFAGISGKKSLVIFYSINGQNPKTRLLILRLRISKFLHLILHR*

>peptide 2 (44 aa)
VGLSVTGLSGNIRTHIFPPRRAYRVIALRPASICLTVIQAGSSA*

Sequence

>CNT30656274
GTGGGTCTTAGTGTAACCGGTTTGTCGGGAAATATACGTACCCATATTTTTCCACCACGACGTGCATATCGTGTTATTGCTCTTCGTCCTGCTTCTATCT
GTCTCACCGTGATCCAAGCGGGTTCAAGTGCTTGAAGAGCATATCTACCAAAACAAATACGATTGCCTCGGCAGGATTTTCCTTTCATTCTTCCTCTATG
TTGTTTGCGAAATCTGGTTCTTTTGGGGTTATACATAGCAATTATATTAAATGATTTATCAATTTTCATTAAATCTTATAGAAAGAGGTACAATTTCTTC
TTTTGCAGGGATTTCAGGAAAAAAGTCTCTTGTCATTTTTTATTCTATCAATGGACAGAATCCGAAGACAAGATTACTTATTCTTCGTCTACGAATATCC
AAATTTTTACACCTAATACTCCATAGATAGTCCGAATTGGATAGCAACAATAATCAATTTTAGCGCGAATTGTTCGGAGGGGAAGTCTACCCTTTTTA