« Back to Triticum dicoccoides search


Detailed information on CNT30656215


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30283705Triticum dicoccoidesTriticum aestivum49.9325.8699.45362forward
CNT30382812Triticum dicoccoidesTriticum turgidum44.2851.0399.07321forward
CNT30684208Triticum dicoccoidesTriticum urartu33.7910091.84245forward
CNT30719891Triticum dicoccoidesTriticum spelta27.8639.6199.5202forward

Expression of CNT30656215

Peptides detected in this lncRNA

>peptide 1 (36 aa)
FCNLILKNCFLLPHPADTSRFHYFTEVSSMREDSTR*

>peptide 2 (44 aa)
MQVSLMPVQGTLPNSSGSSTRIQAVTMCLLRMISSATQLGRSWI*

Sequence

>CNT30656215
GTTTTGTAATTTAATACTAAAGAATTGCTTTCTCTTGCCTCATCCGGCGGACACTTCTAGGTTCCATTATTTCACTGAAGTGAGCTCCATGAGAGAGGAT
TCCACAAGGTGAGGTCCGCCGTGAGGGGTGGCCAGCGATGTGAGGGAGCAGCCGCGACCAGCGCTAGCAGACTCCAACGCGCCCAAGCCCCGGCCAAGGC
TATAGCAGCTGCTTTCGCGTGCCGTCGTTCCCCTCCAGCAGATCCCTGGGAGAAGGCGGGGAACTGCAGGGCGTCCGACCGGCTGGGTGAAGCGCCGCTT
CGCCGTGATGTCGCAGGAGGTCGTGTAGGCGCACATCAAGATGGCGTACATCACCATTACGGCCACCTTTTCTGCTCAGAGCCGGGAGACGAGTACGTGA
TCGAGGAACTCGTTGAGTACGCTAACAAGGATCAAGCTTTCGTCAACTCTAAGAATTTTGCAGATGCAGGTGTCATTGATGCCAGTGCAGGGGACGCTAC
CGAACTCAAGTGGGAGTTCGACGAGGATTCAGGCCGTTACTATGTGCCTTTTACGGATGATCAGTAGTGCAACCCAGTTGGGGCGATCGTGGATCTAGCA
ATTGGGGTTGTCTTTTTTTATTTTGGTTTCGTAGTCAGACCTTGATTGTATTCTGGATGATGTATGATATATTCATGTATTGTGTGAAGTGGCGATTGTA
AGCCGACTCTTTATCCCTTTCTTAT