Detailed information on CNT30656195


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676994Triticum dicoccoidesSetaria viridis36.1918.6498.9293reverse complement
CNT30632746Triticum dicoccoidesCapsicum annuum33.4611.8993.0286forward
CNT30221828Triticum dicoccoidesHordeum vulgare42.0212.31100108reverse complement
CNT30383861Triticum dicoccoidesTriticum turgidum57.5924.5499.32148forward
CNT30481523Triticum dicoccoidesChara braunii25.2927.0895.3865forward
CNT30576813Triticum dicoccoidesOryza barthii43.9715.3398.23113reverse complement
CNT30581628Triticum dicoccoidesEchinochloa crusgalli43.9733.0498.23113reverse complement

Expression of CNT30656195

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LQVAKSRHRGAKPSRRCGLLGKISLLSLE*

>peptide 2 (33 aa)
PGGEEPTSRCQTFPSMWTLGEDQPVIPRVTFIR*

Sequence

>CNT30656195
CTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGGACTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCG
TTGAGCGACGGCCGACTTTCGTCTCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGACCAATGTCCGTCTGGCCCGAG
GAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTC