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Detailed information on CNT30656101


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG86|RS271_HORVU, E-value = 4e-82

BLAST vs NONCODE:
NONSTUT000620, E-value = 1e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628786Triticum dicoccoidesVigna unguiculata30.245.9292.44225forward
CNT30435195Triticum dicoccoidesAegilops tauschii31.2840.2497.42233forward
CNT30130551Triticum dicoccoidesLolium perenne31.2834.2197.85233forward
CNT3067544Triticum dicoccoidesLeersia perrieri31.2814.1696.57233forward
CNT30720017Triticum dicoccoidesTriticum spelta36.7833.1795.99274forward
CNT30368046Triticum dicoccoidesSorghum bicolor31.2838.297233forward
CNT30576569Triticum dicoccoidesOryza barthii31.2819.2696.57233forward
CNT30582668Triticum dicoccoidesEchinochloa crusgalli30.238.7997.33225forward
CNT30116662Triticum dicoccoidesOryza nivara31.2810.3196.57233forward
CNT30594254Triticum dicoccoidesEragrostis curvula31.2828.1197.42233forward

Expression of CNT30656101

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MRRCWSGGIPSLSWILALTLSMVSDDSTSSVMVLPVRVFTKICILAAAGWSPPRAAAATAVAAAGLGLGWAAGWNGG*

>peptide 2 (30 aa)
NLSPHRISVISRKDNIILQGFSFQRQTGHI*

Sequence

>CNT30656101
AAAATTTAAGCCCACATCGCATATCAGTAATATCCAGGAAAGATAACATAATACTCCAAGGTTTCAGTTTTCAAAGACAAACGGGACACATATAAATGAG
TTCAATTTGAAGAGCAATCGCAAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCACTTGCCGCAGTAGTGGCGGTCGAAGTGGTTTGCC
ATGAAGGTCCCGGCGCCGCACTCAGCGTTGGGGCACTCCTTCCTGAGCCTGGTGACCTTACCAGTGGCGTCGTCGACCTTGTAGAACTGGAGGACGGCGA
GCTTCACCTTCTTGTGCTTGTGCTTTTGCTTCTTGGGCTTGGTGTACGTCTTCTTCTTGCGCTTCTTGGCGCCACCGCGGAGGCGGAGCACCAGGTGGAG
GGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCC
TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCCAGCGTGATGGTCTTACCCGTCAGGGTCTTCACGAAGATCTGCATCT
TGGCGGCGGCGGGGTGGTCGCCTCCGCGCGCTGCGGCGGCGACGGCAGTGGCGGCGGCGGGGTTGGGTTTGGGCTGGGCGGCGGGGTGGAATGGAGGCTA
GGGTATGGAAGGGTCTGGCGATATATAAGTATAAGTAGGCGGGAG