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Detailed information on CNT30656091


BLAST search results

BLAST vs Swiss-Prot:
sp|P05621|H2B2_WHEAT, E-value = 9e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200086Triticum dicoccoidesPisum sativum31.3951.5980.73275forward
CNT30383318Triticum dicoccoidesTriticum turgidum100.2395.5499.54878forward
CNT30597299Triticum dicoccoidesFraxinus excelsior22.636.0780.3198forward

Expression of CNT30656091

Peptides detected in this lncRNA

>peptide 1 (48 aa)
LMHNYFSISVCTTEFSSYNYQIPRNSVVALVADNQSSATKIQMARQDH*

>peptide 2 (49 aa)
MVGFLLYLASLADSPASFSKMSLMKEFMMDMALEEMPMSGCTCFSTLKM*

Sequence

>CNT30656091
CTGATGCATAATTATTTCTCAATCTCGGTTTGCACCACTGAATTCAGTTCTTACAACTACCAAATTCCAAGAAATTCAGTAGTAGCACTGGTTGCAGATA
ACCAGAGTTCAGCAACCAAAATACAAATGGCCAGACAAGATCACTAATACAGATAGGACCACAACTTCAGTTCTAGATAGATTTCAGTTTGCCAAAGCAG
CAACTTCAGCTCTTACAACCAACGGGCCAACAAAGCGTTGGCAATCACCCAGCACAGGTACTACTACCACCACCACTACTTGCAGATAGATAGATAAGCA
GAGTCAAGAGTACAGATGCAGATGCAGAAACCAACTGCACGCCGTCAGTCTAGGAGGATGTGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTG
CTTGGCGAGCTCCCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCTAGAGGTGATGGTGGGCTTCTTGTTGTACCTCGCGAGCTTGGCCGACTCG
CCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTCAGCACCTTGA
AGATGTAGATCTTGTACGTCTCCACGCCCTTCTTCGCCTTGCTGCCCTTCTTCCTGCCCCGGGTCTTCCCCTCGCCGCCGGCCTCCTTGGACGCCGTCTT
GCCTGCCGGCAGCCGCTTCTCGGCCTTGGGCTTCTTCCCCGCGGGGGTCTTCTCCGCCGCCTTCTCCACCTTGTTCTCGGCCGCCGGCTTCTTGTCTGCC
TTTGGGGCCATGGCTGCCGCTGGAGCTTCTCGGAGGTGAGAGTGAGGGAGAGGTGTTTCGCTCGGAGGTGGGGAAT