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Detailed information on CNT30655883


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRB7|TBA_WHEAT, E-value = 6e-125

BLAST vs NONCODE:
NONGMAT000219, E-value = 3e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677760Triticum dicoccoidesSetaria viridis67.9353.4789.9485forward
CNT30522101Triticum dicoccoidesSetaria italica80.9554.5390.66578forward
CNT30640127Triticum dicoccoidesNymphaea colorata38.2434.2187.55273forward
CNT30547493Triticum dicoccoidesIpomoea triloba75.2148.0386.96537forward
CNT30371538Triticum dicoccoidesArabidopsis thaliana57.8486.9587.17413forward
CNT30501067Triticum dicoccoidesCoffea canephora42.4441.9186.14303forward
CNT30727923Triticum dicoccoidesCorchorus capsularis64.2938.7788.24459forward
CNT3071007Triticum dicoccoidesQuercus suber54.3475.9383.76388forward
CNT30379228Triticum dicoccoidesManihot esculenta75.6361.9387.78540forward
CNT30507454Triticum dicoccoidesNicotiana attenuata43.9848.3889.17314forward
CNT30709049Triticum dicoccoidesGlycine max43.1444.4488.64308forward
CNT3098615Triticum dicoccoidesSolanum tuberosum34.0347.3790.53243forward
CNT30177039Triticum dicoccoidesSecale cereale91.0447.8695.85650forward
CNT30224141Triticum dicoccoidesHordeum vulgare45.2447.589.47323forward
CNT30391523Triticum dicoccoidesTriticum turgidum67.6565.5493.58483forward
CNT3086234Triticum dicoccoidesVigna radiata42.4457.1786.14303forward
CNT30555352Triticum dicoccoidesOryza glaberrima67.7953.5486.36484forward
CNT30144688Triticum dicoccoidesMedicago truncatula27.7355.7787.88198forward
CNT30247087Triticum dicoccoidesAvena sativa64.0162.4394.31457forward
CNT3075301Triticum dicoccoidesBrassica juncea25.9134.8487.57185forward
CNT30265526Triticum dicoccoidesBrassica rapa64.9946.7386.42464forward
CNT30445643Triticum dicoccoidesSaccharum spontaneum81.5165.6190.89582forward
CNT30953Triticum dicoccoidesZea mays72.8354.9790.19520forward
CNT30229012Triticum dicoccoidesAnanas comosus33.1928.5986.92237forward
CNT30219368Triticum dicoccoidesKalanchoe fedtschenkoi32.2139.3887.39230forward
CNT30208739Triticum dicoccoidesHelianthus annuus28.9952.4187.92207forward
CNT30720142Triticum dicoccoidesTriticum spelta23.9547.7798.25171forward
CNT30361562Triticum dicoccoidesSorghum bicolor74.9354.190.09535forward
CNT30359250Triticum dicoccoidesLactuca sativa27.3128.6885.13195forward
CNT30482824Triticum dicoccoidesChara braunii41.3238.7682.03295forward
CNT30570163Triticum dicoccoidesVitis vinifera54.947.3487.24392forward
CNT3052700Triticum dicoccoidesAmborella trichopoda19.3343.6788.41138forward
CNT3024728Triticum dicoccoidesPopulus trichocarpa38.2433.6287.91273forward
CNT30119652Triticum dicoccoidesCitrus clementina31.0929.1383.33222forward
CNT30582828Triticum dicoccoidesEchinochloa crusgalli81.5167.8390.03582forward
CNT30726259Triticum dicoccoidesLupinus angustifolius73.2563.0987523forward

Expression of CNT30655883

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MPSPTYQWTKARLAYMRSNLWSMREKTSTTLVELEIMHTALWTLARSPPGTTPGGW*

>peptide 2 (53 aa)
MVATAALTSLGTTSPRYMRQQAMYLPWRGSHLAIIDEGSKALLVISATDSCSW*

Sequence

>CNT30655883
GATAAAGCCACTCGGGCAGATCATGGGATAGCAGCAGCACGCCTTGGGAAAGCACCAGGAGGCAGGCTCTAGTACTCGTCGCCCTCGTCACCGTCCTCAC
CCTCGTCGAACTCAGCACCAACTTCTTCATAGTCCTTCTCCAGGGCAGCAAGATCCTCACGGGCCTCAGAGAACTCTCCCTCCTCCATGCCCTCACCGAC
GTACCAGTGGACGAAGGCACGCTTGGCGTACATGAGGTCAAACTTGTGGTCAATGCGGGAGAAGACCTCGACGACACTGGTGGAGTTGGAGATCATGCAC
ACAGCCCTCTGGACCTTGGCAAGGTCACCGCCTGGGACAACACCTGGTGGCTGGTAGTTGATACCACACTTGAAGCCAGTGGGGCACCAGTCAACAAACT
GGATAGTGCGCTTGGTCTTGATGGTGGCCACAGCTGCGTTGACATCCTTGGGAACAACATCACCACGGTACATGAGACAGCAGGCCATGTACTTGCCATG
GCGGGGGTCACACTTGGCCATCATAGATGAAGGCTCAAAGGCGCTGTTGGTGATCTCAGCAACAGACAGCTGCTCATGGTAGGCCTTCTCAGCTGAGATC
ACTGGGGCATAGGAGGAAAGCATGAAGTGGATCCTCGGGTAGGGCACCAAGAATCCCTGGAGACCAGTGCAGTTGTCTGAAAGCTTCCTGATACGGTCAA
GGCACAGATCAACA