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Detailed information on CNT30655853


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186386Triticum dicoccoidesSecale cereale44.5841.0184.06251reverse complement
CNT30283310Triticum dicoccoidesTriticum aestivum99.4724.4698.75560forward
CNT30383022Triticum dicoccoidesTriticum turgidum99.4724.0498.75560forward
CNT30438033Triticum dicoccoidesAegilops tauschii44.2325.8693.57249forward
CNT30681623Triticum dicoccoidesTriticum urartu84.0120.1293.23473forward
CNT30719766Triticum dicoccoidesTriticum spelta83.6638.5798.51471forward

Expression of CNT30655853

Peptides detected in this lncRNA

>peptide 1 (77 aa)
RRQDRSCIAPSVSDALRRPELSRLAPPVSGAIRRQEPRGAKAVRQESPSLTSGMLRGLEPLSWLEARWDPSRLALLA*

>peptide 2 (52 aa)
MGSVAASSARLRRAAPRPAVDLAGSKTGPSRLVSLAFGTPKASPRLWLTRSL*

Sequence

>CNT30655853
CCGGCGGCAAGACCGGAGCTGTATAGCGCCGTCCGTCTCTGACGCGCTTCGCCGCCCGGAGCTGTCACGGTTAGCGCCACCCGTCTCCGGCGCGATTCGC
CGCCAGGAGCCACGGGGTGCGAAGGCAGTAAGACAGGAATCGCCGTCGCTCACCTCCGGCATGCTGCGCGGCCTGGAGCCGTTGTCTTGGCTGGAGGCAA
GATGGGATCCGTCGCGGCTAGCTCTGCTCGCCTAAGGCGCGCTGCGCCACGCCCGGCCGTGGACTTGGCCGGCAGCAAAACGGGGCCGTCGCGGCTAGTG
TCGCTCGCCTTCGGCACACCCAAGGCCAGCCCAAGGTTGTGGCTGACCCGCTCCCTGTGAGGTGGTGGCACGGTGGAATTGCAGCGCGTGCAGCCGGTGG
CTGAGATTCCGCGGGAGGTCGCGCCGTCACAGTGGAAGATGCGAACTCGATGCAAACTCAACAGGCAAAGGTATTGAAGAATGGCACCTGTGTCTCCTTC
TTGGATTGACTGCATCCGCTTTGATCGGAGATAATTTTTATAATCCTTTTGACCAAAGCTGAG