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Detailed information on CNT30655811


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 1e-51

BLAST vs NONCODE:
NONGMAT000508, E-value = 4e-38

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30178072Triticum dicoccoidesSecale cereale83.3780.4492.66436forward
CNT30283432Triticum dicoccoidesTriticum aestivum10099.4399.43523forward
CNT30383650Triticum dicoccoidesTriticum turgidum68.4537.199.72358forward
CNT30679384Triticum dicoccoidesTriticum urartu10086.399.62523forward

Expression of CNT30655811

Peptides detected in this lncRNA

>peptide 1 (46 aa)
VYIDFQLQMRVALFHDSLGTTEEVANHTSRGIIKLLGSAGEGRGSA*

>peptide 2 (74 aa)
MSPEMRFTPPLRARRRIAGLVMPWMLSRSTFLWRLAPPLPSPLPPLPRPDMVADELALVRAARNCRIGGVVVIGA

Sequence

>CNT30655811
GGTGTATATTGATTTCCAACTCCAGATGCGAGTAGCTTTGTTTCACGATTCACTTGGAACTACAGAGGAAGTAGCAAACCACACTAGTCGCGGTATCATC
AAGCTTTTGGGATCTGCAGGGGAGGGGCGAGGAAGCGCCTAGCCGCCGAAGCCGTAGAGGGTGCGGCCCTGGCGCTTGAGGGCGTAGACGACGTCCATGG
CGGTGACGGTCTTGCGGCGGGCGTGCTCGGTGTAGGTGACGGCGTCGCGGATGACGTTCTCGAGGAAGATCTCGAGGACGCCGCGGGTCTCCTCGTAGAT
GAGCCCCGAGATGCGCTTCACGCCGCCCCTCCGAGCGAGGCGCCGGATCGCCGGCTTGGTGATGCCCTGGATGTTGTCGCGGAGCACCTTCCTGTGGCGC
TTGGCGCCGCCCTTGCCGAGCCCCTTGCCTCCCTTGCCGCGCCCGGACATGGTCGCCGACGAACTCGCCTTGGTTCGAGCTGCGAGAAATTGTCGGATTG
GAGGAGTGGTGGTGATTGGTGCG