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Detailed information on CNT30655772


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG86|RS271_HORVU, E-value = 2e-82

BLAST vs NONCODE:
NONSTUT000620, E-value = 1e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316655Triticum dicoccoidesCorylus avellana27.771.7593.81226forward
CNT30178120Triticum dicoccoidesSecale cereale51.8447.3292.43423forward
CNT30283510Triticum dicoccoidesTriticum aestivum41.1846.7399.7336forward
CNT30220676Triticum dicoccoidesHordeum vulgare29.0442.198.31237forward
CNT30240506Triticum dicoccoidesAvena sativa29.0430.7497.05237forward
CNT30456592Triticum dicoccoidesSaccharum spontaneum27.4527.2595.09224forward
CNT30341903Triticum dicoccoidesEragrostis tef29.0428.0897.89237forward
CNT30369422Triticum dicoccoidesOryza glumipatula28.9218.0495.76236forward
CNT30499448Triticum dicoccoidesDigitaria exilis28.3130.696.97231forward

Expression of CNT30655772

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MRRCWSGGIPSLSWILALTLSMVSEDSTSSVMVLPVRVFTKICILAKAGWSPPRAAAATAVAAAGLGLGWAAGWNGG*

>peptide 2 (31 aa)
QEHMYQQDTCSTILSPSEQQSIKNDSRHEID*

Sequence

>CNT30655772
TGCAAGAACACATGTATCAACAAGATACATGTTCTACGATCTTATCACCATCAGAACAACAAAGCATAAAAAATGATAGCCGACATGAAATAGATTAACG
TCATCAGAATGACCAAAATTTAAGCCCACATCGCATATCAGTAATATCCAGGAAAGATAACATAATACTCCAAGGTTTCAGTTTTCAAAGACAAACGGGA
CACATATAAATGAGTTCAATTTGAAGAGCAATCGCAAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCACTTGCCGCAGTAGTGGCGGT
CGAAGTGGTTGGCCATGAAGGTCCCGGCGCCGCAATCGGCGTTGGGGCACTCCTTCCTGAGCCTGGTTACCTTGCCGGTGGCGTCGTCGACCTTGTAGAA
CTGGAGGACGGCGAGCTTCACCTTCTTGTGCTTGTGCTTTTGCTTCTTGGGCTTGGTGTACGTCTTCTTCTTGCGCTTCTTGGCGCCACCGCGGAGGCGG
AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCG
GCGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCAC
GAAGATCTGCATCTTGGCGAAGGCGGGGTGGTCGCCTCCGCGCGCTGCGGCGGCGACGGCAGTGGCGGCGGCGGGGTTGGGTTTGGGCTGGGCGGCGGGG
TGGAATGGAGGCTAGG