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Detailed information on CNT30655703


BLAST search results

BLAST vs Swiss-Prot:
sp|P20143|PSAH_HORVU, E-value = 7e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693639Triticum dicoccoidesOryza sativa30.0811.2790.74108forward
CNT30673198Triticum dicoccoidesSetaria viridis30.0847.3789.81108forward
CNT30521234Triticum dicoccoidesSetaria italica30.0814.9489.81108forward
CNT30178026Triticum dicoccoidesSecale cereale93.0459.8693.71334forward
CNT30283591Triticum dicoccoidesTriticum aestivum68.25100100245forward
CNT30591852Triticum dicoccoidesMusa acuminata23.420.1484.5284forward
CNT30240485Triticum dicoccoidesAvena sativa69.6484.7593.2250forward
CNT30131491Triticum dicoccoidesLolium perenne72.4252.7492.69260forward
CNT3011150Triticum dicoccoidesZea mays30.0812.7787.04108forward
CNT30679155Triticum dicoccoidesTriticum urartu91.6498.5100329forward
CNT30367799Triticum dicoccoidesSorghum bicolor22.5612.4490.1281forward
CNT30370255Triticum dicoccoidesOryza glumipatula30.0816.9590.74108forward
CNT30318832Triticum dicoccoidesAsparagus officinalis22.283.9286.2580forward
CNT30149479Triticum dicoccoidesBrachypodium distachyon64.6260.2689.66232forward
CNT30101773Triticum dicoccoidesOryza rufipogon30.0813.1190.74108forward
CNT30582819Triticum dicoccoidesEchinochloa crusgalli25.9111.1489.2593forward
CNT30496965Triticum dicoccoidesDigitaria exilis30.0831.7688.89108forward
CNT30116717Triticum dicoccoidesOryza nivara30.0813.1490.74108forward
CNT30604129Triticum dicoccoidesOryza punctata30.0817.2289.81108forward

Expression of CNT30655703

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGSSRTLSSSPRLVKGAAKVLKNLLCRPL*

>peptide 2 (33 aa)
TEDIDRAIGGNPSDPWYTSTRREEEEGLDCRST*

Sequence

>CNT30655703
CAACAGAGGACATAGATAGGGCCATAGGGGGGAATCCATCAGATCCATGGTACACAAGCACGAGGCGAGAGGAGGAAGAAGGCCTTGATTGCAGATCTAC
TTAGATCTTGCCACGTGGCCCCGGGGTGGGGGGCAGCTGGGGCCCCTTCTTGATGGGGAGCAGCAGGACCTTGAGCAGCAGCCCTCGCTTGGTGAAGGGC
GCGGCGAAGGTGTTGAAGAACTTGCTCTGCAGGCCGTTGTAGGGCGACGCCGCGTCGCTGCCGTACAGGTCCCACTGCCCCGTCGTGTTGGCGATGTCGT
CCAGGTCGAAGTAGACGCTCTTCTCCCCGTACTTGGCCACCACCGCCGCCCCGCGAGCC