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Detailed information on CNT30655661


BLAST search results

BLAST vs Swiss-Prot:
sp|P68430|H32_ONOVI, E-value = 3e-85

BLAST vs NONCODE:
NONORUT005433, E-value = 3e-122

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315797Triticum dicoccoidesCorylus avellana70.9858.0980.73384forward
CNT30700039Triticum dicoccoidesQuercus lobata61.9268.5183.28335forward
CNT30279437Triticum dicoccoidesChenopodium quinoa65.4346.2181.36354forward
CNT30200358Triticum dicoccoidesPisum sativum65.2556.7583353forward
CNT30709007Triticum dicoccoidesGlycine max31.4271.4382.35170forward
CNT30284356Triticum dicoccoidesTriticum aestivum90.0275.599.38487forward
CNT30220094Triticum dicoccoidesHordeum vulgare65.4361.6798.02354forward
CNT30565750Triticum dicoccoidesActinidia chinensis66.3632.6782.17359forward
CNT30474628Triticum dicoccoidesSaccharum spontaneum54.7124.8989.19296forward
CNT306284Triticum dicoccoidesZea mays43.25109.3585.47234forward
CNT30719823Triticum dicoccoidesTriticum spelta90.0267.83100487forward
CNT30368649Triticum dicoccoidesSorghum bicolor46.0359.2992.37249forward
CNT3018856Triticum dicoccoidesCyanidioschyzon merolae34.280.4381.08185forward

Expression of CNT30655661

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MSSSVLFWYLRISRSATVPGRKRWGFLTPPVAGADLRAALVASCFLGALPPVDFLAVCLVRAMESEMRRQGG*

>peptide 2 (31 aa)
MRRASWMSLGMMVTRLAWMAQRLVSSKRPTR*

Sequence

>CNT30655661
CAACGCTGGACAAAGGCTAAGGTGGACCTAAACACTCACGGCGCACAGATTGCGGCCTAGGCCCTCTCTCCACGGATGCGGCGGGCAAGCTGGATGTCCT
TGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGAAGAGGCCCACCAGGTAGGCCTCGGCGGCCTCCTGCAGGGCGGAGAC
GGCGGAGGACTGGAAGCGGAGGTCGGTCTTGAAGTCCTGGGCGATCTCACGGACGAGGCGCTGGAAGGGGAGCTTGCGGATGAGCAGCTCCGTGCTCTTC
TGGTACTTGCGGATCTCGCGGAGCGCGACGGTGCCGGGGCGGAAGCGGTGGGGCTTCTTGACGCCGCCGGTGGCCGGGGCGGACTTGCGGGCGGCCTTGG
TGGCCAGCTGCTTCCTCGGCGCCTTGCCGCCGGTGGACTTCCTCGCCGTCTGCTTGGTGCGGGCCATGGAGTCGGAGATGCGCCGGCAGGGAGGCTGAGG
AGATTTGGGGGATTGGGAGGGATGGGGGTGAGGAGGAAGAA