Detailed information on CNT30655408


BLAST search results

BLAST vs Swiss-Prot:
sp|P10330|NU5M_OENBE, E-value = 3e-120

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30224150Rosa chinensisHordeum vulgare36.07100.4794.42215forward
CNT30389925Rosa chinensisTriticum turgidum88.9337.794.53530forward
CNT3089191Rosa chinensisVigna radiata64.7728.5595.85386forward
CNT30627905Rosa chinensisDaucus carota10023.7496.31596forward
CNT30679240Rosa chinensisTriticum urartu99.8340.6493.11595forward
CNT30481385Rosa chinensisChara braunii26.0119.1689.03155forward
CNT30725625Rosa chinensisLupinus angustifolius86.4129.6197.67515forward

Expression of CNT30655408

Peptides detected in this lncRNA

>peptide 1 (63 aa)
DTGVGPSIASGDQVCNPICADFPTAPIKSKIQIRVMALNLILQEIQEFLGALARAKMVEKSTV*

>peptide 2 (36 aa)
MDVTTINITTVGLSNTGSEPQEASNISDEIHGAILR*

Sequence

>CNT30655408
GGATACTGGAGTGGGACCCTCCATAGCATCGGGTGACCAAGTATGCAATCCTATCTGTGCAGATTTCCCAACAGCACCAATAAAAAGTAAAATACAAATA
AGAGTTATGGCATTAAATCTCATATTGCAAGAAATCCAAGAATTTCTGGGGGCACTAGCACGAGCAAAAATGGTTGAAAAGTCTACTGTTTGAAAGAGAG
TAAAACGGCCCAAAATCCCAGGAGCTAATCCAAAATCACCTACTCGATTGACAGGCATAGCTTTTGTAGCTGCTTTATCTGCCTGAAGTCGTGTAAACCA
GAAATGAATTAACAAATATGAAGCAAGACCTACTCCCTCCCATCCTAGGAATAATTGAAGAGAGTTATCTCCAGTCACCAACATTGACATAAAAAAAGTA
AGAATGGATAAATAACACATAAATCGAGGGCTATGCGGATCCTCGGACATATATGATATGGAATAAAGATGAACCAAGCTACTTATGGATGTAACCACAA
TTAACATCACTACGGTCGGGCTATCAAACACGGGGTCAGAACCCCAAGAAGCATCAAACATTTCCGATGAGATCCATGGAGCAATTCTTAGATAGC