Detailed information on CNT30655399


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403755Rosa chinensisBeta vulgaris17.0620.9297.08137forward
CNT30223386Rosa chinensisHordeum vulgare60.5247.691.98486reverse complement
CNT30592666Rosa chinensisMusa acuminata38.6131.8685.16310reverse complement
CNT30171414Rosa chinensisTrifolium pratense12.3328.4593.9499forward
CNT30439298Rosa chinensisAegilops tauschii64.1353.4892.43515reverse complement
CNT30207123Rosa chinensisHelianthus annuus11.5836.3310093forward
CNT30719954Rosa chinensisTriticum spelta33.8786.6291.54272reverse complement
CNT30418333Rosa chinensisPapaver somniferum47.749.3691.91383reverse complement
CNT30104537Rosa chinensisOryza rufipogon15.5740.9892.8125forward
CNT30575481Rosa chinensisOryza barthii16.1924.2190130reverse complement

Expression of CNT30655399

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MNCRVDRSDPDAAVAPRRYGLDPLLPTPGHYSMSGIRGDILDVTTPLVGGCAALPFDRYTVE*

Sequence

>CNT30655399
CGTGAAGTCACCGAATGAATTGCCGAGTAGATAGATCAGATCCGGACGCGGCTGTTGCTCCGCGGCGATACGGACTCGACCCGCTCCTACCCACCCCGGG
GCACTATAGCATGTCGGGAATAAGGGGGGACATACTGGACGTAACCACTCCCTTGGTTGGGGGCTGTGCCGCCCTGCCTTTCGATCGATACACAGTTGAG
TAGGCCGATCACGAACGCTACGGGTGTGGGAGCGATCCTGGTCAGGGAAGGCTAAGACGGCGCCTCGCATATGGGTAGCAAGAGGGCGCTTATGCCCCGA
CGGTGGGGCCTTATGGGGAAGGGCCCAGCCAAATAGGGACAGCACACCCCCCACTTCAAGCGCATCTCTGTATCGACTGAATCACTCTAAGAGTCTAGTC
GGTGGAACCGGTGAACCACGCGAGCTGGTTAGATGCGTGGGGCAGAGGGCTCGTAGTACCCCCTTTTCAGGATCCAGCCTTTTTTTCGCTTCGGTAGTGA
ATCACCTACTAAAAAAAGAGGCTGGCCTGCGCGCCCTATTTGAGACTACTAAGGCAGGCGGTGGACTCTTTCATTAGGGAAGGGAAGAAGGGGCCTAAGC
ACGGCGGATGCCGTACACTTGAGTGGCAAAGGAAAGCGAGATCGTACCCCGGACACTGCGGAAGATCAAGTTGGTGAGCCGTGTGATGGGAAACCTTCCC
GCACGGTTCGGAGAGCACTGAATTAGAATGAGAGGTTCACCACCACATCATTGCATGCAAGGGGAGCTCGCTCGATTCGCAAATTGGTCCGACTCGTAAT
TCA