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Detailed information on CNT30655376


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A360|CLPP_COFAR, E-value = 1e-60

BLAST vs NONCODE:
NONCSAT000277, E-value = 1e-54

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730377Rosa chinensisCorchorus capsularis14.8138.7481.25160forward
CNT30632291Rosa chinensisVigna unguiculata17.7820.483.85192forward
CNT30504293Rosa chinensisNicotiana attenuata42.4118.1391.7458forward
CNT30588249Rosa chinensisMusa acuminata23.8955.7281.01258forward
CNT30173048Rosa chinensisTrifolium pratense9.8126.9784.91106forward
CNT30607170Rosa chinensisGossypium raimondii33.9850.7690.46367forward
CNT3057113Rosa chinensisAmborella trichopoda33.9812.7886.1367forward

Expression of CNT30655376

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MHLLMHTSHYTSIHNASSSPGLRKGTLGTPIGIK*

>peptide 2 (43 aa)
MIGSIRLGLVNDPITILPFVVVQKYYKNTMMVPLLYIFISSVI*

Sequence

>CNT30655376
GCATTGCATACGGCTCTATAATGGAATTCGCTTTTTTTACCTTACCTTACTTACATCGAAGAAATAGAAAATAAATGATAGGGTCTATCAGACTCGGGTT
GGTAAATGATCCAATAACCATCCTTCCTTTTGTAGTAGTTCAAAAATACTATAAAAATACTATGATGGTTCCGTTGCTTTATATATTTATTTCATCTGTT
ATTTAGCAATCCCAAAGTTTCTTTTTTTTTTTTTTCAAATAAAAAACAAGATTTATTTTCATATTCTTTCATAACCTAAAAATTGTTAAGATTAAGAGCC
CCTGCTGTGAAAACAAAAAAGTTTGTGACGCTGAAATAGGCCTCCCGATAGATTGGCTAAAATCGAAAATGCCTTTTTATCTCATACTACTCTTTCGATA
CGTAATCTAAGGTTTAAAAAAAATTTCTCATATCGAATTCGAAGTGCCATGCTATTATTACTTAATATTCATATAGTGCGAAGGCATAGTTTTCTTTTTT
TCTCTCAAATCAAATAAAAAACTCATTGGCGCCGAGCGTGAGGGAATGCTAGACGTTTGGTAATTTCCCCTCCAACAAGAATAAAAGATCCCATCGAAGC
GGCTAATCCCATGCATATTGTCTGTATATCTGGTCGCACAAATTGCATAGTATCATAAATAGCTACTCCGGGTATTACCCATCCGCCAGGAGAGTTTATA
AACAAATACAGATCTTTGGTATCATCCTCTATGCTGAGATATACCATAAGACCAATAAGTTGATTCGAGATCTCGCTATCAACCCCTTGGCCTAAAAAAA
GTAATCTTTCTCGATAAAGTCGGTTGATTGGGATAAAACGATATCCCTTAGAAACCGTACATGCACCTTTTGATGCATACGTCGCACTATACGTCAATCC
ACAATGCATCTTCCTCTCCAGGACTTCGAAAAGGTACTCTTGGAACACCAATAGGCATTAAATAAAAGAAAAATTAAGTACTATATCTCACTTTGATGTG
AAAGCGTAACAGTGGGTTTAGTGGCCTAATACTATTGATTTTATTATCCTATTTTCTCCATAGATTGACTAAGTTCATAA