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Detailed information on CNT30655374

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30618210	Rosa chinensis	Sesamum indicum	18.01	50.72	93.33	105	reverse complement
CNT30145111	Rosa chinensis	Medicago truncatula	32.59	42.51	91.58	190	forward
CNT30421666	Rosa chinensis	Papaver somniferum	93.83	103.01	82.63	547	forward

Expression of CNT30655374

Peptides detected in this lncRNA

>peptide 1 (29 aa)
AIFPKELQMDPRVHQSLMVLKQLSLRYMQ*

>peptide 2 (50 aa)
GNISKGVANGSAGSPIIDGSKTAKPTLHAIVPKITTGKIYKRSFGHAGSP*

Sequence

>CNT30655374
GGGCAATATTTCCAAAGGAGTTGCAAATGGATCCGCGGGTTCACCAATCATTGATGGTTCTAAAACAGCTAAGCCTACGTTACATGCAATAGTACCTAAA
ATTACTACTGGAAAAATATATAAAAGATCATTTGGCCATGCGGGTTCTCCATAATAATTATGACCCATCCCTTTAGCCAATTTAGCTCTTAACACAGGAT
CGTTCAAGTCAGGTTTTTTTTGCTTTATGGGTCTCACACACTCCCATAATCCATTTTATCTTCGGAGAATTCGCTTCAACTATAAGTGTCAAAAATATAG
ATTTTTGTAGAGTTGAAGAGAAATATCCAAATACATGTCTTATTTTTTTCAATAATCCATATTTGTAGCAATGAAATACTGTTGTTCCTACCCCAAGTGA
TAAATGATTAATTCAAAATATTAATGGTATAGAGTCTTCCTTATAAAGGGCCCGAAATACCTTGTTTACGTATCATTGGGAAATGCATTAACATAAATAC
GGCAGTAAGAAGAGGTAATACAAAAGTGTGTAAACTATAAAAACGGGTCAAAGTGGATTGTCCCACACTAGCACTTCCGCGTA