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Detailed information on CNT30655373


BLAST search results

BLAST vs Swiss-Prot:
sp|Q49KZ6|RR4_EUCGG, E-value = 3e-121

BLAST vs NONCODE:
NONORUT000576, E-value = 8e-75

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618958Rosa chinensisSesamum indicum24.4618.3785.351024forward
CNT3020650Rosa chinensisCitrullus lanatus24.9159.9486.391043forward
CNT30730408Rosa chinensisCorchorus capsularis10.7595.1493.56450forward
CNT30632297Rosa chinensisVigna unguiculata18.3443.4485.03768forward
CNT30201085Rosa chinensisPisum sativum13.4927.9791.33565forward
CNT3094383Rosa chinensisSolanum tuberosum5.1310087.44215reverse complement
CNT30194121Rosa chinensisSecale cereale11.2752.7490.89472forward
CNT30292655Rosa chinensisTriticum aestivum11.4423.6985.18479forward
CNT30219998Rosa chinensisHordeum vulgare1.8623.6491.0378forward
CNT30510912Rosa chinensisSolanum lycopersicum5.66100.8588.19237forward
CNT30171250Rosa chinensisTrifolium pratense2.4127.6793.07101forward
CNT30245953Rosa chinensisAvena sativa1.9831.287.9583reverse complement
CNT30598583Rosa chinensisFraxinus excelsior5.9925.288.05251forward
CNT30445979Rosa chinensisSaccharum spontaneum9.196.9591.34381forward
CNT3017916Rosa chinensisZea mays10.9422.2191.05458forward
CNT30606803Rosa chinensisGossypium raimondii3.7755.8389.87158forward
CNT30232528Rosa chinensisAnanas comosus10.4622.1392.69438forward
CNT30217417Rosa chinensisKalanchoe fedtschenkoi9.1581.8489.56383forward
CNT30713835Rosa chinensisMalus domestica golden5.6632.3386.5237reverse complement
CNT30627898Rosa chinensisDaucus carota20.8728.488.9874forward
CNT30351181Rosa chinensisEragrostis tef2.8723.7685120forward
CNT30362312Rosa chinensisSorghum bicolor2.229.4994.5792reverse complement
CNT30595954Rosa chinensisOryza meridionalis10.1732.4489.67426forward
CNT30430934Rosa chinensisPapaver somniferum24.8115.984.411039forward
CNT3022800Rosa chinensisPopulus trichocarpa8.1210092.06340forward
CNT30332506Rosa chinensisDioscorea rotundata10.648.7486.71444forward
CNT30149145Rosa chinensisBrachypodium distachyon10.9425.590.83458forward
CNT30103542Rosa chinensisOryza rufipogon8.9352.7591.71374forward
CNT30116859Rosa chinensisOryza nivara6.7868.1188.38284forward
CNT30604206Rosa chinensisOryza punctata4.6648.9989.23195forward
CNT30114189Rosa chinensisFicus carica24.2425.7789.461015forward

Expression of CNT30655373

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MINEAKFTEVLQRIIRGIVSIVRPYCIEILYI*

>peptide 2 (33 aa)
MFSVPCMDKAYVIEYITSIIRINFQSHSFIIIL*

>peptide 3 (33 aa)
MTLFRTLFKIWREVITKLRDISVFIFSYLKVFY*

>peptide 4 (94 aa)
MDSLFLILISVVRKYWIKWTRNENTLLIYRYMNERKIPRPKPLTYFPQPLYLSEKRGGKICRVILVRIKSDESNILQLAIHLFSNRPTYYLLFD*

>peptide 5 (35 aa)
MECTYLYKMNINGSLFTRVLSHNHYVGEMAEWLKA*

>peptide 6 (39 aa)
KEVFTGSLSTKILTSGSGERIIIESSSFRTTHTKRPANK*

Sequence

>CNT30655373
GAAAGAAGTTTTTACGGGATCCCTATCTACCAAAATTTTAACTTCTGGTTCCGGCGAACGAATAATCATTGAGTCCTCCTCTTTCCGGACAACACATACA
AAGAGACCCGCCAATAAATAGTTAAGTAATTAGTGAACCTATGAGAGATGTTTAGACTTAGTTTTTTTTCTTTACATCTCCCATCTATCTATTTTCTTTA
GTTATTCACTAGAGCAATTATGATCTGGAAGTCGATCCGGGGCAAGTGTTCGGATCTATTATGACATAGCCGGGAGGCGCTTAACGGACCTTTTTAATCT
TATAAACCCCTTTTCTTGGCTTTGAATAGACTCAAAAACAATTTTTTGTGCAATCTAGTGTATTCATATCTCAATTATACGTTGCTAAACGGAACTGCTT
TATACTTTATGTCTTGCATGCATATAACATATTAATATGACTCTATTCCGTACTCTATTCAAAATTTGGCGAGAAGTAATTACTAAACTAAGAGACATCT
CAGTATTTATATTTAGTTATTTGAAGGTTTTTTATTAGTTTTAAAAGTGGAAACGAAAAAGATTCTCTACTTTAGCTGTATATTGATCTGTATATCGTTT
ATTCCTACGAAATACTAGACGAAATAGAACGATCTTAGAAGGGATATAATGAAATTCTTTGATTGGTTCTTCCCAGAAAAAGATCCGTTTTAGTTATTTG
ACCGATAGGGACAACAAATAATTAATTCTAACAAATAGAAAAAATGAAACTAAATAACTAAATAAATATAACAGTGTTCTTATTCAAACCGCCTTGTAAT
CTTCAACCAATTCTGTGCTTCAATATAATTACCAGGAGTAAGCGCTATAGCTTGTTTCCAATACTCGGCGGCTTGATCGAACCAAGCCTCCGCAATTTCC
GAATCCCCTTGCTGAACGGCCTATAGTCGCACGTAATGACAGATCACGGCCATATTATTAAAAGCTTGTGGTAAGAACGGGTTTCGTTCTAGTGCCCGAA
AATAATATTCTAAAGCTTTTGTATGTTCTCCGTTCCTTGTATGGATAAGGCCTATGTTATAGAGTATATAACTTCGATCATAAGGATCAATTTCCAGTCG
CATAGCTTCATAATAATTTTGTAAAGCTTCCGCATAATTTCCTTCGGATTGAGCCGACATCCGTTACGGTCGTCATTCGATTCAAAGAATCTCCGTTCCA
GAACCGTACATGAGATTTTCACCTCATACGGCTCCTCCTTTATGTGCATAATGAAAAAAAGACATGGAATCAAAAAAGATTGAAAGATTCTCATTATAAA
CTGAGCGGGGCTGGTGTTTTTACAAGAAATCTCTAGCCAACCTTCTTGTAAAAGATCTTTCCTTAACATCAAGCATGTTGGCATTATATTAGATAAAAAA
GGCGACCCCAACAATTTCTTTGTCTTCAACGCCCTAAAATTTACAGGAATTAGTCACTTCAACAGTCTTCGATGGTTATACGGGTATCCAAAATACGAAC
GAGATGGATGTTTGTTGTCCCAACCATTCTTGTTAGTCCCGATCCTGATAAGTAATAAGTAAAGGGAATTATTTCTAACAAAGTTTTCGTGTGTTGATTC
CTAGGAGTAGTGCTTCTTCCCCTATGCCTCCTATTGGTACTAGTGAAGTAGGGTTAACTTAACCTATAGGTGTAACCTTTCGCTCAATACTCTAGAATCG
ACAATCGAAGCATCTGAGGCTGCATTAATCGGGGATACACGACAGAAGGGGTTGCTTTATTTACAAACTTCACCTTCAACAAGCGTAGATTTTTTCAATA
ATTTTTCTTCCTAATTTCGAATAATTAATAATAATGTTGTCTTTCTCTTAAGACTGAGAGCGGTAAAAAAAAAAAAAAGAAATAAAAAAAATCAAATCGC
ACCATCTCTGTAATAGGTGAATGCCTCTTTTTCTCCTGAAGTTGTCGGAATTATTCGTAATAAGATATTGGCTACAATTGAAAAAGTTTTATCAATAAAA
TTTCCATTTATCCCAGATCTAGACATAGGTGTATTAATCCATTCTATAATTTTTTTGAATTTCCTTTCGTGAGAAAATGATCTCACAAACAAAGGAATTG
TACAGTACGAAATAACGTAAAAACGGATTCATTAAAAAAGACGCCCTTTTACTCCAATTGTTTATTTTTGACAGGAATCAATAAAAAAAAAATTTCATAT
TTGAATCCGATTCGATTTCATCCAAATGTAGTAATATAAAAATGAAGGGAACTGTTCCTATTTCATTGAGGTTGAAGAATCAAAGAATTTCTCTTAGAGA
TTAGGATAATTCGAGAAGTTTTGATTCAAAAGAGGAAAAAGAATCAAATAATAATTCTATGATTAAAATGGAATCCCGTCTGCTTTGTGTTATGTGTATA
GTGGGTATACGCTATACAATCAAATAGAAAAACCGGGGGGTGGTTCATGAATTTGGAATAAATCTATGGGTTAAGAGGTTGAAGTAAGGAATTCTTGTTG
AAAAATCGAAAACTGGAAAAGGATTTTAGAATTTTTATGAAAATAGAATAATAGTTTAAACTAAATAGAATCGTGGTATAAAGGTAGCCATTAAACATAG
TCTAAAAAAATAGAACGATCCGCGGATTCGTTCCAATTGAGTGATTTAATCCGGTATAAATATTAGAAAGGGCGGAAACATTATCTTCGCAAACATGAAT
AGATATATCTTTATTTTACAATTTTTTTTTTCATAAAAAAAATTATCTTTATCCCCAGCCTCGGAGGGAGGATTTATCTTTGATGAAAACTTTTATGCTT
TTAGAGTTCCATTTTTAGAGTGAAAATGGAATGTACATACCTATACAAAATGAATATCAATGGCTCACTATTCACTCGGGTTTTGAGCCATAATCATTAT
GTAGGAGAGATGGCCGAGTGGTTGAAGGCGTAGCATTGGAACTGCTATGTAGACTTCTGTTTACCGAGGGTTCGAATCCCTCTCTTTCCGTATTCTTCAC
CTAATTCATCAATGTTACTGGCCACAATGCATCAAATAAGAATGGATACTCCAACAACTAGCCTGTAGCTTTTCTTTGATATGGATTCTTTATTCCTAAT
CCTAATTTCTGTGGTACGAAAATACTGGATAAAATGGACAAGGAATGAAAATACCCTACTGATCTATAGATACATGAATGAGAGAAAAATCCCCAGACCA
AAACCCTTAACTTACTTCCCTCAGCCCCTTTACTTAAGCGAAAAAAGGGGGGGCAAAATTTGCCGTGTTATTTTAGTTAGGATTAAGTCTGACGAGAGTA
ATATTCTACAACTAGCAATTCATTTATTTTCAAACCGACCCACTTACTATCTATTATTTGATTGACTAATCCTTTATATTGGAATGGGTGAAGAGTCAAA
TGTTTTGGTAATTCCTCAGGGGGGGATGAATCAAGATAATTTTGAATCAGAGTCTTAGATTTTTTTTCATCTCTCACCGTAATAATATCTCTGGGTTTGC
ATCGATAACTTGGTATATCTACTATACGACCATTAACTAAAATATGCCTGTGGTTAACTAATTGGCGGGCTTGAGGAATAGTCGAAGCCATACCCAATCG
AAAAAGGATGTTATCCAAACGCATTTCAAGTAGTTGTAGTAAAACCTGACCTGTTGACCCTTTGGCTTTTCCGGCGATACGAACGTATTTAAGTAATTGT
TGTTCCGTAAGACCATAATGAAAGCGCAATTTTTGTTTTTCTTCTAAACGAATACGATATTGCGATTTTTTGCCGGGGCGCGATTGGGTTCGAAGATCGC
TTCCGGCTCTAGGCTTTTTACTAGTTAGCCCCGGTAAAGCCCCCAGACGGCGGATTTTTTTGAAACGAGGTCCTCTGTAACGCGACATAAAGACTCCTTT
TTTTTATGAAATTTCATAAACCAAAATTAAAACTAAACTAAAATATGATAAATGAAGCGAAATTTACTGAAGTATTACAAAGAATAATTAGAGGAATTGT
ATCAATAGTCAGACCTTATTGTATAGAAATATTGTATATATAATTGTATTATATAAATAAAAAAGAAAAAGAATTTGAAATAATCGAAAAAAAAAAATCA
AGGGCTCTTTTCTTGATTGATTTGTTCTACAGAGACCAAAACCCTCCAATCCAATTTTTATTAATTAATAATTGGAAGTTTCTATGA