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Detailed information on CNT30655299


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Rosa chinensisOryza sativa34.9231.6398.59991reverse complement
CNT30548882Rosa chinensisIpomoea triloba38.6941.6598.181098forward
CNT30304298Rosa chinensisTriticum aestivum34.9237.4598.28991reverse complement
CNT30221494Rosa chinensisHordeum vulgare20.3346.4698.27577forward
CNT30400948Rosa chinensisTriticum turgidum34.9239.6498.49991reverse complement
CNT30585815Rosa chinensisMusa acuminata36.1242.2394.831025forward
CNT30234810Rosa chinensisBrassica oleracea19.5673.3294.23555reverse complement
CNT30147394Rosa chinensisMedicago truncatula36.2651.6698.451029forward
CNT30440683Rosa chinensisAegilops tauschii27.6381.1698.98784forward
CNT30662061Rosa chinensisTriticum dicoccoides34.9251.6498.59991reverse complement
CNT3081478Rosa chinensisBrassica juncea26.2264.2594.89744forward
CNT30263293Rosa chinensisBrassica rapa5.1134.6993.1145reverse complement
CNT30143344Rosa chinensisLolium perenne38.248.4697.881084reverse complement
CNT3016633Rosa chinensisZea mays38.256.7295.571084reverse complement
CNT30229838Rosa chinensisAnanas comosus15.6110097.97443reverse complement
CNT30218527Rosa chinensisKalanchoe fedtschenkoi26.2249.9798.92744reverse complement
CNT30689128Rosa chinensisTriticum urartu34.9253.3197.88991forward
CNT30369805Rosa chinensisOryza glumipatula33.9367.1596.26963forward
CNT30154718Rosa chinensisPrunus persica16.4967.5393.8468forward
CNT30575706Rosa chinensisOryza barthii33.8339.3996.35960forward
CNT30582488Rosa chinensisEchinochloa crusgalli34.9281.6398.89991forward
CNT30116696Rosa chinensisOryza nivara34.9224.9998.69991reverse complement
CNT30115142Rosa chinensisEutrema salsugineum3.121.6297.7388forward

Expression of CNT30655299

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MLSKPIHLSETEESGISCVGVKSEDLRRKAKSEGSSLGPYRRWSAKAWGANGIRYPGSPCRKR*

>peptide 2 (50 aa)
MWFNSIQRAKPYQPLTYEQQNLSLTGWYLLSYRCCMAVVSSCREMFGQVL*

>peptide 3 (73 aa)
MWNRLAPYVLRLFGRHGPSPVNGIGMEACHLNIVRLLSSVSNHIFVFSILLSSYQNQIIFRNRVEIRAILYFR*

>peptide 4 (72 aa)
MKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIGPTITHDFCVTLVTQRLLVVLLAHTTVGSSTGVKS*

>peptide 5 (42 aa)
MMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNIA*

>peptide 6 (47 aa)
MTSSPHGPYGLGHTRATMAITMGSKAVRRSESGKIASVRIVLCNSGT*

>peptide 7 (37 aa)
MYKNLNRGLGLPPSLEEPYEAEAPRTVLKPSLSSNGA*

>peptide 8 (38 aa)
MKNHKRRKKRKNKKGKEVVRPVHQVLPLQGPIIVKKRV*

>peptide 9 (39 aa)
MQVERCFRARLSRLENKVANGCVTRGNLPNSSGPNPEES*

>peptide 10 (40 aa)
MTGLEEEAPANSVPAAAVRRGGQVFFGMTGRKGHVGGESG*

Sequence

>CNT30655299
GGCCGCGTTGTAGTCTCGTTCGCCCGGTCCATCCGTGTGTAAACGCTCACTCTATAAGATAAGTAGAACAATCCACTTAGACTTTCTTTGAGAGTATGAA
AAATCATAAGAGAAGGAAAAAAAGAAAAAATAAAAAAGGAAAGGAAGTAGTACGCCCGGTTCACCAGGTTCTACCACTGCAGGGCCCAATCATAGTTAAA
AAAAGAGTTTGATCCTGGCTCAGAAGGAACGCTAGCTATATGCTTAACACATGCAAGTCGAACGTTGTTTTCGGGCGCGCTTGTCTCGCCTTGAGAACAA
AGTGGCGAACGGGTGCGTAACGCGTGGGAATCTGCCGAACAGTTCGGGCCCAAATCCTGAAGAAAGCTAAAAAGCGCTGTTTGATGAGCCTGCGTAGTAT
TACGGTAGTTGGTTAGGTAAAGGCTGACCAAGCCAATGATGCTTAGCTGGTCTTTTCGGATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCC
ACGGGGGGCAGCAGTGGGGAATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAATGCCGCTTGTAAAGCTCTTTCG
TCGAGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGAC
TGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTGAAAGTCGCCAAAAAGTGGTGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAG
GAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGAAGATCTACGAAGGAAGGCCAAAAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGAGTGCGA
AAGCATGGGGAGCGAACGGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGTTCGCCCTTGGTCTATGCGGATCAGGGGCCCAGCTAACGCG
TGAAACACTCCGCCTGGGGAGTACGGTCGCAAGACCGAAACTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCATGTGGTTTAATTCGATACAA
CGCGCAAAACCTTACCAGCCCTTGACATATGAACAACAAAACCTGTCCTTAACGGGATGGTACTTACTTTCATACAGGTGCTGCATGGCTGTCGTCAGCT
CGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCTCGTTTTGTGTTGCTGAGACATGCGCCTAAGGAGAAAGTCTTTGCAACCGAAGTGA
GCCGAGGAGCCGAGTGACGTGCCAGCGCTACTAATTGAGTGCCAGCACGTAGCTGTACTGTCAGTAAGAAGGGAGCCGGCGCCTTTCTCGCTTGTTTAGT
AAAGTCGCCCAGGTGACGACGACGTGCGGAGAAAGACTCGGCATTCAGGCGAGCCTGTGGTACGTAGTGAGTTTACGCTCCGAAACAAAGAAAAAGGTGC
GTGCCGCACTCACGAGGGACTGCCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACA
ATGGCAATTACAATGGGAAGCAAGGCTGTAAGGCGGAGCGAATCCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGTTGGA
ATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCTGTACACACCGCCCGTCACACCCTGGGAATTGGTTTCGCCCGAAGCATC
GGACCAACGATCACCCATGACTTCTGTGTAACACTAGTGACACAAAGGCTTTTGGTGGTCTTATTGGCGCATACCACGGTGGGGTCTTCGACTGGGGTGA
AGTCGTAACAAGGTAGCCGTAGGGGAACCTGTGGCTGGATTGAATCTTTAGCCTTTCGCACTAAGCAAGTAAACAAACTACCTTAGCGCTTCACACTAAG
CAAGTAAACTCCCTTCTTGTTCATCAATCGGAAATCAAGACAAACCGGGCACTACGGTGAGACGTGAAAAGACCCGATCCCATTCCGACCTCGATATGTG
GAATCGTCTTGCGCCATATGTACTGAGATTGTTCGGGAGACATGGTCCAAGCCCGGTAAATGGCATAGGAATGGAAGCCTGCCATCTCAATATCGTAAGG
CTTCTATCTTCTGTTTCGAATCATATTTTTGTCTTTTCCATATTACTATCATCATATCAAAACCAAATTATTTTTCGAAATAGAGTGGAAATAAGGGCAA
TCCTCTATTTCAGGTAGCTCCGCTGGTTAGAGCAAAGGACTGAAAATCCCTTTATGAGTGGCACTACCTGAATCCAAAAAAAGAAGGGAAATCCTTTTAA
ACCACCCAAGCGCTTCTTACGTTGGTTATTTGGCCGAAATCGCGAGTAATGGGACTCGTCAGAGCATTCCGTATCGTAAAGTCGTGAGAGCTATTGAAAA
TTAGGATCTCTCTCTCTAACTCATTCTCTTCCTTTGCGGTTTCACTCTATTTGTGACCTTTTCTCGTATGTGGGTAGATAATCGATCGTCTTTCTTTTCT
TTTTTGTTGTTTTCTTATGTACAAAAACCTTAACCGCGGGCTGGGCCTACCTCCATCCCTAGAGGAGCCGTATGAGGCGGAAGCTCCACGTACGGTTTTG
AAGCCGAGCCTTTCCAGCAATGGGGCCTAGGGACCGATATGATGATTGGTTTAGGTAGGGCGGCCGGCCTACTACGGGCACCTGTAGGGATTAGTGCGTG
AGACCGCGATCCACAAACTAACGCATGGGACTCACCCG