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Detailed information on CNT30655263


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Rosa chinensisOryza sativa55.0138.7992.04993forward
CNT30677083Rosa chinensisSetaria viridis23.3258.890.02421forward
CNT30524664Rosa chinensisSetaria italica50.7566.9191.59916forward
CNT30639555Rosa chinensisNymphaea colorata82.687.393.91491forward
CNT30536068Rosa chinensisEucalyptus grandis93.4648.9892.591687reverse complement
CNT30513456Rosa chinensisJuglans regia93.5253.1893.541688forward
CNT30378667Rosa chinensisArabidopsis thaliana15.9625.7495.49288forward
CNT30500477Rosa chinensisCoffea canephora87.7686.9993.121584forward
CNT30617317Rosa chinensisSesamum indicum17.6795.894.04319forward
CNT30269781Rosa chinensisChenopodium quinoa93.4157.0692.231686forward
CNT30730500Rosa chinensisCorchorus capsularis65.7610094.361187forward
CNT30630109Rosa chinensisVigna unguiculata94.1353.992.231699forward
CNT30196858Rosa chinensisPisum sativum92.0289.4590.251661forward
CNT30503447Rosa chinensisNicotiana attenuata62.7167.6694.431132reverse complement
CNT30711335Rosa chinensisGlycine max19.7290.8292.98356reverse complement
CNT3044711Rosa chinensisPrunus dulcis26.4310096.02477reverse complement
CNT30638683Rosa chinensisCapsicum annuum28.3799.2289.45512reverse complement
CNT3090649Rosa chinensisSolanum tuberosum93.3561.6393.831685forward
CNT30193801Rosa chinensisSecale cereale73.0793.4191.361319forward
CNT30291213Rosa chinensisTriticum aestivum84.6543.9891.491528forward
CNT30225309Rosa chinensisHordeum vulgare48.3172.3788.19872forward
CNT30400299Rosa chinensisTriticum turgidum55.0146.5591.94993forward
CNT30588765Rosa chinensisMusa acuminata33.1985.8293.16599reverse complement
CNT3088853Rosa chinensisVigna radiata14.7965.9395.13267reverse complement
CNT30511396Rosa chinensisSolanum lycopersicum33.5266.1290.25605forward
CNT30554009Rosa chinensisOryza glaberrima18.561.2890.72334forward
CNT30441975Rosa chinensisAegilops tauschii34.1377.2992.05616forward
CNT30248027Rosa chinensisAvena sativa53.5299.1890.48966reverse complement
CNT30664460Rosa chinensisTriticum dicoccoides2099.7293.35361forward
CNT30310298Rosa chinensisCamelina sativa56.6867.0894.231023reverse complement
CNT3062651Rosa chinensisArabidopsis lyrata37.5681.4994.4678reverse complement
CNT30460907Rosa chinensisSaccharum spontaneum86.3746.7991.731559forward
CNT30136065Rosa chinensisLolium perenne30.9186.9291.04558forward
CNT3017045Rosa chinensisZea mays86.3257.7991.011558reverse complement
CNT30206724Rosa chinensisHelianthus annuus81.567.7994.361471forward
CNT30126841Rosa chinensisCorymbia citriodora18.9591.9491.23342forward
CNT30713553Rosa chinensisMalus domestica golden33.4689.6194.37604forward
CNT30627950Rosa chinensisDaucus carota23.3297.9192.64421forward
CNT30688464Rosa chinensisTriticum urartu94.1392.3491.231699forward
CNT30722943Rosa chinensisTriticum spelta60.3354.1911089forward
CNT30364730Rosa chinensisSorghum bicolor21.1667.3791.62382reverse complement
CNT30596725Rosa chinensisOryza meridionalis85.8744.9191.741550forward
CNT30357533Rosa chinensisLactuca sativa23.4341.5594.8423forward
CNT30154922Rosa chinensisPrunus persica91.9798.2892.411660reverse complement
CNT30410430Rosa chinensisPapaver somniferum82.2751.3393.471485reverse complement
CNT30646402Rosa chinensisCannabis sativa60.1785.8590.331086reverse complement
CNT30319706Rosa chinensisAsparagus officinalis93.3558.6394.121685forward
CNT30332807Rosa chinensisDioscorea rotundata77.8985.1194.11406reverse complement
CNT30148090Rosa chinensisBrachypodium distachyon76.9547.8191.941389reverse complement
CNT30103033Rosa chinensisOryza rufipogon83.5597.2390.451508reverse complement
CNT30576679Rosa chinensisOryza barthii18.563.6291.92334forward
CNT30585638Rosa chinensisEchinochloa crusgalli32.5237.9291.65587reverse complement
CNT30604668Rosa chinensisOryza punctata20.8985.8888.86377forward

Expression of CNT30655263

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGHVESRVNQKGPPCKAKYSWVTDSEVVP*

>peptide 2 (38 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFSAGRESGT*

>peptide 3 (75 aa)
VQTRKGLRWIPRDPETRKGVVSDEMLWEVENKRRSGDSRIGYPFELLLNPCVGKKQPGELKHLSSQRKRKQKRFR*

Sequence

>CNT30655263
GTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGGACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTTGGGAAGTTGAAAATAAGCGTA
GATCCGGAGATTCCCGAATAGGTTACCCTTTCGAACTGCTGCTTAATCCATGTGTAGGCAAGAAACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAG
GAAAAGAAAGCAAAAGCGATTCCGGTAGTAGCGGTGAGCGAAATGGGAGCAGCCTAAACTGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGC
TGCTAGGCAAAGCGGTGGAGCTCTGCTCCCTAGATGGCGAGAGTCCAGTAGCTGAAAGCATCACTAGCTTACGCTCTGACTCAAGTAGCATGGGACACGT
GGAATCCCGTGTGAATCAGAAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCT
TATCGGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCATTGGGCTCTGACCGCGTGCCTGTTGAATAATGAGCCGGGGACTC
ATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCAGTAGCGAAAGCAAGTCTTCATAGGACAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCC
ATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCAAACTGATTGATGTTGAAGAATCAGCGGATAAGTTGTGGTTAAAGGTGAAATGCCA
CTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCAGTGCGGGCCGCGAGA
GCGGTACCTAATCGAGGCAAACTCTGAATACTAGACATGACCTCAAAATAACAGGGTCAAGGTCGGCGATTGAGACGGTGGGGGATAAGCTTCATCGTCG
AGAGGGAAACAGCCCGGATCACCAGCAAAGGCCCCTAAATGATCGCTTAGTGATAAAGGAGGTAGGGGTGCAGAGACAATCAGGAGGTTTGCCTAGAAGC
AACCACCCTTGAAAGAGTGCGTAATAGCTCACTAATCGAGCGCTCTTGCGCTGAAGATGAACGGGGCTAAGCGATCTGCAGAAGCTGTGGGATGTAAAAA
TGCATCAATAGGGGAGCGTTCCGCCTAGAGAAAAGCAACCGCGCGAGTGGGGGTGGACAAAGCGGAAGCGAAATATCGACTTGAGTAACGCAAACATTGG
TGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAAGGGTAGTCGATGG
ACAACAGGTGAAGATTCCTGTACTACCCCTTGTTGGTCCTGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGAGAGGTGC
CCTTGATTTTTCAGAGTAAGAAGGGGTAGAGAAAATGCCCCGAGCCAATGTTCGAGTTCCAGGCGCCATGGCGCTGAAGTAACCCATGCCATACTCCCAG
GAAAAGCTCTAACAACCTTCAACAAAAGGGTACCTGTACCCGAAACCGATATAGGTAGGTAGGTAGAGAATACCTAGGGGCACGCCCATATTCCAGGACC
ATACAATCCTGTTACATGAAATGCACCAAAACCAAAGCAAGCCACCTCTGAGAGAAATAAATGAATTCCAAAGATCTTAGGCAAATCCAAAGAGGGTTTT
CATGT