Detailed information on CNT30654896


BLAST search results

BLAST vs Swiss-Prot:
sp|F4KA51|LRL23_ARATH, E-value = 2e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317114Rosa chinensisCorylus avellana21.158.7687.1470forward
CNT30512061Rosa chinensisJuglans regia26.2822.3185.0687forward
CNT30167335Rosa chinensisPistacia vera61.0314.8479.21202forward

Expression of CNT30654896

Peptides detected in this lncRNA

>peptide 1 (36 aa)
HINMGSSTNAGNLINKVLSIPFGFFKNLHSHTTTIQ*

>peptide 2 (32 aa)
MKASAASSLSFPLISEVQRKRITNNKIQDPAIV

>peptide 3 (45 aa)
TTLTWEVLLMLATSLTKSSPFPLDSLRTFTATRQPFNSFPSYTSP*

Sequence

>CNT30654896
ACCACATTAACATGGGAAGTTCTACTAATGCTGGCAACCTCATTAACAAAGTCCTCTCCATTCCCTTTGGATTCTTTAAGAACCTTCACAGCCACACGAC
AACCATTCAATAGCTTCCCTTCGTACACATCACCATAACCGCCTTGACCCAGTTTATCTTTAAATGAGTTGGTCATTTTCCTTACATCCGAAAATTTGTA
TCTTTGTACTGCTAGAGGTCCAATGTTCTGAATGAAGGCCTCAGCAGCATCTTCATTGTCATTTCCCCTAATCAGTGAAGTCCAACGGAAGAGAATAACA
AACAATAAAATACAAGATCCTGCAATAGTCG